Bacillus kandeliae: WDJ61_04870
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Entry
WDJ61_04870 CDS
T10863
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bkn Bacillus kandeliae
Brite
KEGG Orthology (KO) [BR:
bkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bkn03400
]
WDJ61_04870 (addB)
Enzymes [BR:
bkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WDJ61_04870 (addB)
DNA repair and recombination proteins [BR:
bkn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
WDJ61_04870 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
ATPase_2
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WXB93965
LinkDB
All DBs
Position
931813..935307
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AA seq
1164 aa
AA seq
DB search
MSIQFILGRSGTGKTACILDEIKNQVKEQPIGDPVIYLVPEQMTFLSEYDLASDPALGGV
IRAQVYSFTRLAWRVLQETGGMSRKHISSAGLNILIRKIIEDQKEDLKIFATAADKNGFI
SHVEAMLTEFKRYCVTPEELIETREEVQQQKGSKALADKLHDLQAIYSEFEKSLIGKYVD
SEDYLRLLSEAVASSDYLKKSEVYIDGFHSFTPQEYEVIEQLMKHATRVTIALTVDEAFR
TNIPEDTYLFRQTAETYSTLYELAKSSGVQVEEDQLLTMPRRYQEESLIHLEKNFDHRPV
ISYNDSTSICFLEATNRRAEIEGIAREIRKLAREDDYRYKQMAILVRNGHEYQQEIETVF
HDYDLPFYIDKKSPMFNHPVIELIRATLEILASNWRYEPVFRAVKTDLLFPLKKDWHKLR
EQMDRLENYVLAYGIRGERWTNGEQWSYRRYRGLEGVNQVQTDEEQRIERELNELKLVIS
EPISRLSRRLKKAKTSRGFCEAFYLYLEELEVPRKLENLSMEAQERGDLITAREHSQAWS
AVIELLDQYVEVLGEEVMTVKKFAATMDAGLETLKFSNVPAAVDQVMIANLELSRLANID
VAFIIGVNDGVLPGKMKEDGVLADDDRELLLSQGMKLAQSSKRKLLDEEFIAYKAFTTPS
SRLYISYPTADEEGKALQPSLFIKRLKEMFPLAEERSLMNDPSELQEGEGLQYVCHPNPT
LSYITTQLQLKRLGYPMYDYWWDVYNFYINTPEQKEKASVVFSSLFYKNKAEVLDEHVSK
SLYGEEILASVSRMELFNSCPFSHFANHGLKLREREVYRLQAPDIGDLFHGALKWIAEEI
EKRGLNWGKLTEKQCLQLAKEAVVHLGPKLQNQILLSSNRHLYIGRKLEQIIGRASYILS
GQARVSGFAPVGIELGFGPQAELPPLSFTLKNGTKMALAGRIDRVDQARNNEEVYLRIID
YKSSGRDLDMTEVYYGFALQMLTYLDIVLTYSQQLVGEKAHPAGVLYFHVHNPMINSKQV
MTIEKIEEEIFKSFKMKGLVLAEEEVVRLMDTSLEGGNSKIISAGINKSNGKLAKSSKVA
HRQQFDQMRQHVRNIYQQSGDDIVAGRVDIAPYQYKKRTPCDFCSYRPVCQFDDMIEDNH
YRTIVPHKKEEVFQKMSETRDERE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcagtttatactcggtcggtctggaacgggaaaaacggcttgtatattagat
gagataaagaaccaagtgaaagagcagccgataggagatcctgtgatttatcttgttcca
gaacaaatgacatttttgtcagaatacgatttagcttctgatccagcgcttggaggagtg
atccgcgcacaagtttatagcttcacccgtcttgcctggcgtgtactgcaagaaacagga
ggaatgagccgaaagcacatttcttcagcaggtttaaatatacttattcgcaaaattatt
gaagatcaaaaagaggacttgaaaatttttgctacagcagcagataagaatggctttatt
agccatgttgaagcgatgctgacggagtttaaacgctattgtgtgacaccagaggaatta
attgagacacgagaggaagttcagcaacaaaaaggctcaaaagcattagcagataaactt
cacgacttgcaagctatctacagcgagtttgaaaagtcactaattgggaaatacgtagac
tctgaagattatttacgattgctatcagaggcagtcgcttcgtcggattatttaaaaaaa
tcagaggtatatatcgatggctttcatagctttacgcctcaagaatatgaagtaattgag
cagcttatgaagcatgcgacacgagttaccattgccttaaccgtcgatgaagcatttcga
acaaacatacctgaagatacttatttgtttcgacaaacagctgaaacgtattcgaccctt
tatgaactagcaaaaagcagcggtgtgcaagtggaagaagatcagcttttgacgatgcca
agacgttatcaagaagagagtttgattcatttagaaaagaactttgatcatcgtccagtg
atttcatataacgattcgacttcgatttgtttcctagaagctacgaatagacgtgccgaa
attgaggggattgctcgagaaatacgaaagcttgcacgagaggatgactatcgttataag
caaatggcaattcttgttcgcaacggtcatgagtatcagcaagagattgaaacagtgttt
catgattatgatctcccattttatatcgataaaaaaagtccaatgttcaatcatccagtc
atcgagttaatccgagcaaccttggaaattttggctagtaattggcgatatgaacccgtc
tttcgagcggtaaaaactgacttgttatttccattaaagaaagattggcataaactacgc
gagcaaatggatcgtttagaaaattatgtgttggcttatggtatccgaggtgaacggtgg
acgaatggagagcagtggagttatcgacgctatcgtgggcttgaaggagtcaatcaagtg
caaacggatgaagagcagcggatagaaagggaattgaatgaattaaagcttgtcatttca
gaaccgatttcgcgtctgtctcgccgattgaaaaaagcgaagacaagcagaggattttgc
gaagcgttttatctatatttggaggagttagaggtcccgagaaaacttgaaaacttgagc
atggaagcgcaagaacgtggcgatttaattacagcgcgagaacatagtcaagcatggagt
gcggtcatagaattactagatcagtacgtagaagtacttggtgaagaagtaatgacagtg
aagaaatttgctgccacgatggatgctggactagaaacacttaaattttctaacgtgcct
gccgctgtagatcaagtgatgatagctaatcttgagctttctaggctggcaaatattgat
gtagctttcattatcggtgtgaatgatggcgtgctacctggaaagatgaaagaagatggt
gtattagcagatgatgatcgtgagctattgctttcgcaagggatgaagcttgctcaaagt
agtaagagaaagcttctagatgaagagtttatcgcttataaagcctttacgacgccatcg
agccggttatatatttcttatccgactgctgatgaagaaggaaaggcattgcagccctct
ctttttataaaaagactaaaggagatgttcccgctcgcagaggagaggtcgcttatgaat
gacccgtcggaactgcaagagggagaaggcttgcaatatgtttgccatccgaatccaacg
ctatcttatatcaccactcagcttcaattgaaaagacttggctatccaatgtacgattat
tggtgggatgtctacaatttttatatcaatacaccggaacaaaaagaaaaagcgagtgtg
gtgttttcaagtctattttataaaaataaggcggaagtattagatgagcacgtcagtaaa
agtttatatggagaagaaatactcgccagtgtctcaagaatggaattattcaatagttgc
ccattttctcattttgccaaccatggtctgaagttaagagagcgagaggtttatcgctta
caggcaccagatatcggagatctgtttcacggggctctgaaatggattgcggaagaaatt
gaaaaacgaggtctaaattggggcaagctgactgaaaagcagtgtttacagttggcaaaa
gaagccgtggttcatttaggaccaaaactgcaaaatcaaattttattaagctccaatcgc
catctatacatcggtcgcaagctggaacaaattatcggcagagcttcttatattttaagc
gggcaagcaagagtgagcggctttgcacctgtcggaattgaacttggctttggaccgcaa
gctgagctaccgccactttcctttacgctaaaaaatggaacaaagatggctttagcggga
agaattgatcgcgtcgatcaagcaaggaataatgaagaagtttacttgcgaattattgat
tataagtcgagtggccgggatttagatatgacggaagtatattatggattcgccttgcaa
atgctgacatatttggatattgtgctaacctattcgcagcagcttgttggagagaaggcg
catccggcaggtgtgctatatttccatgttcataatccaatgattaatagtaaacaggtg
atgacaatcgagaaaattgaagaggaaatcttcaaaagctttaagatgaaggggctcgta
ctcgcagaagaagaggttgtccgcctaatggatacgagtcttgaaggaggaaattctaaa
attatttctgccgggattaataaatcaaatggtaagctagcgaaaagttcgaaagtcgct
cacagacagcagtttgatcagatgcgtcaacatgttcgcaacatttatcagcaatctgga
gatgatattgtcgctggccgggtcgatattgccccttatcaatataaaaaacggacgcct
tgtgacttttgttcttatcgaccagtttgtcagtttgatgacatgattgaagataatcat
tatcgtacgattgtgccgcataagaaagaagaagtttttcaaaaaatgagtgaaacgagg
gatgaacgtgagtaa
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