Bacillus kandeliae: WDJ61_06755
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Entry
WDJ61_06755 CDS
T10863
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bkn Bacillus kandeliae
Brite
KEGG Orthology (KO) [BR:
bkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bkn03032
]
WDJ61_06755 (topA)
03400 DNA repair and recombination proteins [BR:
bkn03400
]
WDJ61_06755 (topA)
Enzymes [BR:
bkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WDJ61_06755 (topA)
DNA replication proteins [BR:
bkn03032
]
Prokaryotic type
DNA Topoisomerases
WDJ61_06755 (topA)
DNA repair and recombination proteins [BR:
bkn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WDJ61_06755 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WXB94320
LinkDB
All DBs
Position
1306854..1308932
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKRYKVKASMGHVRDLPKSQMGVDVNHQYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLNLDISSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIQHFQPEEYWTIDAKFLKDQDTFQATFYGKAGKKVALKSEEEVKAILSTIQGNEFQLAS
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQKEAYDYVKTTHGEEFTTKGVTKKDKKQSNAQDAHEAIRPTSILKEPNSL
KNSLSRDQLRLYKLIWERFLASQMAPAIMDTVSADVVNGEITFRATGSKIKFAGFMKVYV
EGSDDGQEEKEKQLPNLEVGDKVKAEDIDPKQHFTQPPPRYTEARLVKTLEELGIGRPST
FAPTLDTIQKRGYVSLDNKRFIPTELGEIVHELMVEFFSDIIDVEFTAKMERDLDGVEDG
QVEWVQVIDEFYKGFEQHLVKAEAEMEQVEIKDEPAGEDCESCGHPMVFKMGRYGKFMAC
SNFPDCRNTKAIVKEIGVKCPKCSEGNIIERKSKKRRIFYGCDGFPECDFLSWDKPIERK
CPKCEQLLVEKKLKKGVQIQCTSCDYKEEPQT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatttagtaatagtagaatcccctgcaaaagcaaaaacgattgaacgttat
ttggggaagagatataaagtgaaagcatccatgggccatgtgcgtgatttgccaaaaagt
cagatgggtgtagatgtaaaccatcaatatgaaccaaaatatataacgattcgagggaaa
ggcccagttttaaaagaactaaagacagcagcgaaaaaggcaaagaaaatttatcttgca
gcggaccccgatagagagggagaagcgattgcttggcatttagcacacagtttaaatctc
gatatttcatctgattgtcgagtggtttttaatgaaatcacaaaagacgcaattaaagaa
tcttttaaacacccaagaccgattaatatggatcttgtcgatgctcaacaagcacgaaga
atattagatcggcttgttggctataatattagccctcttctttggaagaaagtgaagaag
ggtcttagtgccggaagagtgcagtctgtggcattaaggttaattatcgatcgtgaaaaa
gagatccaacactttcaaccagaggaatactggaccattgatgcgaaattcttgaaagac
caagacacattccaggcgaccttttatgggaaagctggaaagaaagtagcgttgaaatca
gaagaagaagtgaaagcgatcctttcgacgattcaaggtaatgaatttcagttggcaagt
gtgacgaagaaagagcgaaaaagaaatccagctccgccatttacaacgtcatctctacag
caggaagcggcacgtaaattgaattttagagcgaaaaaaacgatgatgcttgcacagcaa
ttgtatgaagggatcgatcttggaaaagaaggaacggttggtttaattacgtacatgaga
accgattcaacgagaatttctgaagtggctcaaaaagaagcttacgactatgtgaagaca
actcacggtgaagaattcacaaccaagggagtaacaaagaaagataaaaaacaatcgaat
gctcaagatgcacatgaagccattcgtcctactagtattttaaaagaaccgaacagctta
aaaaattctctatcaagagatcaacttcgtttatacaaattgatttgggagcgattcctt
gctagtcaaatggctcctgctattatggatacggtaagtgcagatgttgtcaatggggaa
ataacatttcgtgcaaccggttccaaaattaaatttgctgggtttatgaaggtatatgta
gaagggtcagatgatggacaagaagagaaagagaagcaattgccaaacttagaagtagga
gacaaagtgaaggcagaagacattgacccgaaacagcatttcacgcagccaccaccgaga
tatacagaagctcgtcttgtgaaaacactcgaagaacttggtattggtcgtccatctact
tttgcaccaacgctagatacgattcaaaagcgtggctatgtttcgttagataataaacgc
ttcattccgacagagctaggtgaaattgtccatgaattaatggttgagtttttctctgat
atcattgatgtagaatttactgcaaaaatggaaagagatctcgatggtgtagaggatgga
caagtcgaatgggttcaagtaatcgatgaattttacaaaggctttgaacagcatttagtc
aaagcggaagccgagatggaacaagtagagatcaaagatgagccagcaggtgaagattgt
gaaagttgtggtcatccgatggtctttaaaatgggtcgatatgggaaattcatggcttgt
tccaattttcctgattgccgaaacacaaaagccattgtgaaagaaatcggtgttaaatgt
ccgaagtgtagtgaaggtaatataatagaaagaaaaagtaagaaacgacgaattttttac
ggctgcgatggttttccagaatgtgattttctatcgtgggataagccaattgaaagaaaa
tgtccgaaatgtgaacaactattagttgaaaagaagttgaaaaaaggtgtacagattcaa
tgtaccagttgtgattataaagaggagccacagacataa
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