Bacillus kandeliae: WDJ61_12400
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Entry
WDJ61_12400 CDS
T10863
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bkn Bacillus kandeliae
Brite
KEGG Orthology (KO) [BR:
bkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bkn03019
]
WDJ61_12400
03009 Ribosome biogenesis [BR:
bkn03009
]
WDJ61_12400
Enzymes [BR:
bkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WDJ61_12400
Messenger RNA biogenesis [BR:
bkn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WDJ61_12400
Ribosome biogenesis [BR:
bkn03009
]
Prokaryotic type
rRNA helicases
WDJ61_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WXB92051
UniProt:
A0ABZ2N2V4
LinkDB
All DBs
Position
complement(2401042..2402364)
Genome browser
AA seq
440 aa
AA seq
DB search
MTKQRFELYGFRPFINKGIEELGFYEPTEIQERMIPLILKGESAIGQSQTGTGKTHSYIL
PILEKINPAKKEVQAVITAPTRELADQIYKEILKMIKFSEEEITARCYMGGTDKQRDIDK
LKTQPQIVVGTPGRINDLIKEQALFVHRASILVIDEADLMLDMGFIVDVDQVASRMPEQL
QILVFSATIPEKLKPFLKKYMENPEYVHIQPKHISAENIEHVLVSKKSREKIDLLHDMLV
AYNPYLAVVFTNTKQKADEVANALLEKGLKVGRIHGDMSPRDRKRMMKQIRDLDYQYIVA
TDLAARGIDIEGVSHVINYELPRDLDFYVHRAGRTARAGFSGICATIYTPSDEDALARLE
KIGITFSHTDIRQGEWTELKDRNQRKKREKTEDSIDLKAKSIVRKPKKVKPGYKKKMQRE
MTQFKKRERRLESKRGNNKK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaacaacgatttgaattatatggttttcgaccgtttataaataaaggaattgaa
gaattaggtttttatgagccaacagaaattcaagaaagaatgatcccgcttattttaaaa
ggggaaagtgccatcggacaatctcaaacaggaacggggaaaacccattcctatatcctc
ccaatccttgaaaagatcaatcctgcgaaaaaagaagtccaagcggttatcacagcacca
acgagagaattggccgatcaaatttataaagagattcttaaaatgattaagttttctgaa
gaagagatcactgctcgttgttatatgggtgggacggataagcaacgtgatattgataaa
ttaaagacgcagccacaaattgttgttggtacacctggacgaattaatgatctcattaag
gagcaagcgttatttgttcatcgtgcatccattcttgtcatcgatgaagcggatttaatg
cttgatatgggatttattgttgatgtcgatcaagtcgcaagcagaatgcctgaacagtta
caaattcttgtattctcggcaacaattccagaaaagttaaagccatttttaaagaaatac
atggagaaccctgaatatgttcatattcaaccaaagcatatttcagctgaaaatattgag
catgtattagtatcaaagaaaagccgagagaaaatcgatttgcttcatgatatgttagtt
gcttataacccttatttagcggttgtatttacgaatacaaagcaaaaagcggatgaagtg
gcgaatgcactgctagaaaaaggcttgaaagttggtcgcattcatggcgacatgtcacca
agagatcgcaaaagaatgatgaagcaaattcgcgacttagattatcaatatattgttgcg
accgatttagctgctagagggattgacattgagggcgttagtcatgtcatcaactacgaa
cttccgcgcgatcttgacttttatgttcatcgtgccggacgaacagctcgagcaggattt
tcaggtatttgcgccactatttatacaccgagtgacgaggatgccctcgctcgcttagag
aaaataggcatcacattcagtcatacggatattcgtcaaggtgaatggactgaattaaag
gatcgcaatcaacgaaagaaaagagaaaaaacagaagacagcattgatttgaaagcgaag
tcgattgtcagaaaaccgaaaaaagtgaagccaggctataagaaaaaaatgcaaagagaa
atgactcaatttaaaaagcgtgaacgacgcttagaatcgaaacgaggcaataacaaaaag
tag
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