Bacillus kandeliae: WDJ61_13635
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Entry
WDJ61_13635 CDS
T10863
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bkn Bacillus kandeliae
Pathway
bkn03030
DNA replication
bkn03430
Mismatch repair
bkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WDJ61_13635 (dnaE)
03430 Mismatch repair
WDJ61_13635 (dnaE)
03440 Homologous recombination
WDJ61_13635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bkn03032
]
WDJ61_13635 (dnaE)
03400 DNA repair and recombination proteins [BR:
bkn03400
]
WDJ61_13635 (dnaE)
Enzymes [BR:
bkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WDJ61_13635 (dnaE)
DNA replication proteins [BR:
bkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WDJ61_13635 (dnaE)
DNA repair and recombination proteins [BR:
bkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WDJ61_13635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
VPS11_N
tRNA_anti_2
PEP5_VPS11_N
Motif
Other DBs
NCBI-ProteinID:
WXB92291
LinkDB
All DBs
Position
complement(2648237..2651584)
Genome browser
AA seq
1115 aa
AA seq
DB search
MFTHLQIQTGYSLLSSTISIDKLIAKAKQLDYKALAITDRNVMYGVIPFYQACKKEGIKP
LIGLTVDVKSEFTNDCSYPLVLLAKNNTGYHHLLKISSVIQTKAKDGIPIKWLKGYSDGL
FAFTPGLEGEIEGLLQKDVLKAEEVAKFFNQLFEPGHFFLSLQRHGKQEEELVNEGMKTL
SEKLSIPLIVTHQVAYIEKDEAFSLQCLQTIRDGEQLADPMIDDHQRAYFTSQQEMTEWF
SDVPEALQQTNEIAAACEVELAFGRQLLPRFPHAEGKSAGEFLQELCFKGLEEADLAHQP
EYKDRLLYELNIIERMGFSDYFLIVWDFMKFARSQQMLTGPGRGSAAGSLVAYVLDITTV
DPLKYGLLFERFLNPERVSMPDIDLDFPDHCRDEVIQYISQKYGSLHAAQIITFGTLSAK
AVMRDVARTFGFSTKELEQLSKMIPTRPGLTLRQVYEESEKFREWVGASSSNEKLYKTAL
TLEGLPRHTSTHAAGMVITEQPLTDLIAIQEGHDQIFLTQFPMDILEELGLLKIDLLGLR
NLTILERILESIYYSEGKKLNLKNIPLQDSQTFQLLGEGRTTGIFQLESEGMRKVLMRLK
PSHFEDIVAVNALYRPGPMENISTYIDRKHGRKPVEYPHSDIKGILEPTYGVLIYQEQIM
QIASQLAGFSLGEADLLRRAVSKKKREVLNAERQHFVNGARQKGYSEETADKVYHLIVQF
ANYGFNRSHAVAYSFIAYQLAYLKAHYPINFMAALLTSAIGNEEKVKQYMSEAKTMSLQV
FPPSINNSHFPFKAEEGGIRYSLAAIRGIGASVLKAILSAREKGPFVDLFDFCLRVPLKI
VNRKAIESLIFSGAFDEFGQDRAVLLASLDVAIDHVELVGPEDEGLGLFNDTDFFPKPKY
VEAEPITIQEKLALEKEVLGVYVSAHPTKPYQPIFSGFRVVPVAQLLQGHRQVVVGIFMN
EVRAIRTKKGESMAFIHLSDESGEIEGVVFPAIYRKVSTLLQDGSILLVKGDVEERNKKK
QLVVKNVQTVEELQMLQEERNKTLYVKIPHTPDEHLVLEDVHHIFQRFQGQTPVVLHYER
THQTVKLREKNWIKPSEELMTQLEKAVGKDHVVLK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacatttacaaattcagacaggttatagtttgctttcgagcaccatttcaatt
gataagctcattgctaaagcaaaacaacttgactacaaagcacttgcgattacagatcgc
aatgtcatgtacggagtgatccctttttatcaagcgtgtaaaaaagaagggattaagccg
ttaatcggcttaacagtcgatgtgaaaagtgaatttacaaatgactgttcgtatccgctc
gtgctgctagcaaaaaataatactggatatcatcatttgttgaaaatttcaagtgtcatt
caaacaaaagcaaaagacggcattccgattaaatggctaaaagggtattcggatggcttg
tttgcttttactccaggtttagaaggggaaattgaaggtttacttcaaaaagatgtgtta
aaggctgaagaggtagctaagttttttaaccagttatttgaaccaggtcactttttctta
tcgttgcagcggcatgggaagcaagaggaagagctcgttaacgaaggaatgaaaacctta
agcgagaaactttccatcccactgattgtgactcatcaagtggcatatattgaaaaggat
gaggctttttcattgcagtgtttgcagacgattcgtgatggtgaacagctagctgatcca
atgatagatgatcatcaacgagcctatttcacttcgcaacaagaaatgactgaatggttt
tcagatgttccggaagcattacagcaaacgaatgaaattgccgctgcttgcgaagtagag
ctagcttttggtcgccaattgcttccgcgatttccacatgcggaaggaaagtctgcagga
gagtttttgcaagagctttgctttaaaggattagaagaagctgacttagctcatcagccg
gagtataaagatcggctgctttatgaattaaacatcattgaacgcatggggtttagcgac
tattttttgattgtttgggactttatgaagtttgcaagaagccaacagatgttaacaggg
ccgggacggggatcagctgcgggttcacttgttgcgtacgttctcgatattacaacggtg
gacccgctgaaatacggtttgttatttgaacgatttttgaatccggaacgtgtatcgatg
ccggatattgatttagattttccggaccattgtcgcgatgaagtgattcagtatatctca
cagaagtatggttcgctgcatgctgcacaaattattacgttcggtacattgtctgctaag
gctgtgatgcgtgatgtggcaagaacgttcggtttttcaacgaaagagcttgaacagctg
tcaaaaatgattccaacacgtcctggcttaacgttacggcaagtgtatgaagagtcggag
aagtttcgtgaatgggttggagcatcttcaagtaatgagaaactatataaaacagcgtta
acattagaagggcttccgcgacatacgtctacccatgcagctggaatggtcattactgaa
caaccactaaccgacctcattgccattcaagaagggcatgatcagatttttcttactcag
tttccgatggatatattagaagagttaggtttgttaaagattgatttgcttggtctacga
aatttaacgattttagagcggattttagaatctatttattattcagaaggaaaaaagttg
aatttgaagaatatacctttacaagacagtcaaacctttcaattattgggagaagggcga
acaacaggcatttttcaattagagtcggaaggcatgcggaaggtactgatgcgtttaaag
cctagtcactttgaagatattgtggcggtgaatgcactttatcgtccaggtccaatggag
aatatctctacgtacattgatcgcaagcatggtcgaaagcctgttgaatatcctcattcg
gatataaagggaattttagaaccgacctatggcgtgttaatttatcaagagcaaattatg
caaattgcctcgcaactagcgggtttttcattaggagaggctgatttattaaggagagct
gtcagcaaaaaaaagagggaagtgcttaatgctgagcgtcagcattttgtgaatggagca
cgtcaaaagggctatagtgaagaaacggcggacaaggtgtatcatttaatcgttcaattt
gccaactacggatttaaccgaagtcatgcggttgcttatagtttcattgcttatcagctt
gcttatttaaaagcccattaccccattaattttatggcggcacttttaacatctgccatt
ggcaatgaagagaaagtgaaacagtacatgagtgaagcgaaaacgatgagtcttcaagtt
tttcctccttctattaataatagtcactttccttttaaagcagaggaaggtggcattcgc
tatagcttagcggcgattcgcggaatcggagcaagtgtgctgaaagccattttgtcggca
agagagaagggcccctttgttgatttgtttgatttttgtctgcgagtacctttgaaaatt
gtgaacagaaaagcgatagagtcgctgatcttttcaggagcattcgatgagtttggtcag
gatcgtgccgttttattagcaagtcttgatgtggcgatcgatcatgtggagcttgtcgga
ccagaagatgagggacttggtttgtttaatgatacagacttttttccaaagccaaaatat
gtcgaggcggagccgattactatccaagagaagcttgccttggaaaaagaagtgttaggt
gtgtatgtatccgctcatccgacaaagccttatcagccaatatttagtgggttcagggtt
gttcctgttgcccaattgttgcaagggcatcgtcaagtagtggttggtatatttatgaat
gaagtaagagcgattcgtacgaaaaaaggagagagcatggcctttattcatctatctgat
gagagtggagaaatagaaggcgtcgttttcccagctatctatcgaaaagtctccactttg
ttgcaagatggttccattcttttagtaaagggagatgtagaggaacgaaataaaaaaaag
caattggtggttaaaaacgtccaaacagtagaggaactgcaaatgttgcaggaagaaaga
aacaaaacgctgtatgtcaaaattcctcatactccagatgaacatttagttcttgaagat
gttcatcacatctttcaaaggtttcaaggacagacgcccgttgtactacattatgaacga
actcatcaaacggtgaaattaagagagaagaattggattaagccatcagaggagctaatg
acacagttagaaaaggctgttggaaaagatcatgttgtgttgaagtaa
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