Bacillus kandeliae: WDJ61_15575
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Entry
WDJ61_15575 CDS
T10863
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bkn Bacillus kandeliae
Pathway
bkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bkn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WDJ61_15575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bkn03019
]
WDJ61_15575
03009 Ribosome biogenesis [BR:
bkn03009
]
WDJ61_15575
Enzymes [BR:
bkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WDJ61_15575
Messenger RNA biogenesis [BR:
bkn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WDJ61_15575
Ribosome biogenesis [BR:
bkn03009
]
Prokaryotic type
rRNA helicases
WDJ61_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
UvrD-helicase
AAA_19
AAA_22
CMS1
Pyr_excise
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WXB92631
UniProt:
A0ABZ2N4V4
LinkDB
All DBs
Position
complement(3019809..3020981)
Genome browser
AA seq
390 aa
AA seq
DB search
MNTFINLGINERWAKKLSDQSVTEPTPIQQEAIPLLLDGNDVIAQAKTGTGKTFAFLLPM
LEKIDTEKSFIQALIVTPTRELALQITNELQQLTKEEDLNVLAVYGGQDVDQQIKRLNQH
IHIVVGTPGRLLDHIRRGTVDLTDVTTLILDEADQMLHIGFLDEVESIIRETPFTRQTAL
FSATMPKEVRQLAKRYMREPRSIQVQSKEMTVEKISQYVIETTDRRKQQALCQTIDEAQP
FLGIIFCRTKRRVSKLCDEMKAKGYNIDELHGDLSQAKRERVMKRFRDCELHLLAATDVA
ARGLDVEGVTHVFNYDIPQDVESYVHRIGRTGRAGEEGAAYTFAALKDKDLLNALEKGLG
RKLERKEVELGDLPVVKNSRSSSKKNHRRK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttatcaatttaggcataaacgagcgctgggcgaaaaagcttagcgaccaa
agcgtaacggaaccaacaccgattcagcaagaagcgattccgcttttattagacgggaac
gatgtcatcgcccaagccaaaacaggtacgggaaaaacatttgcttttttactcccgatg
cttgaaaaaatagatacggaaaaaagttttatccaagcgttaattgtgacgccaacgaga
gaactggccttgcaaattacgaatgaattgcagcagctaacgaaagaagaagacttgaat
gtattagctgtctatggtggacaagatgtcgaccaacaaattaaacggctcaatcaacac
atacatattgtggtgggaacgcctggacggctgttagatcatattcgtcgaggaacagta
gatttaacggatgtgacgacattaattttggatgaagcggatcaaatgttgcacattggc
tttttagatgaggtggaatcgatcattcgcgaaacgcctttcactagacaaaccgcttta
ttttcagcgacgatgccaaaggaagttcggcaattggcgaaacgctatatgcgcgagccg
cgttcgatccaagtgcagagtaaagagatgaccgttgaaaaaataagtcagtatgtgatt
gaaacgacggatcgccgtaaacaacaggcgctttgccaaacgattgacgaagcccagccg
tttttaggcattattttttgccgaacgaagcgaagagttagcaagctttgcgatgaaatg
aaagcgaaaggctataacattgatgagttacatggtgatttatctcaagcgaagcgggaa
cgagtgatgaaacgattccgcgattgtgagcttcatttgctggcggcgacggatgtagcg
gctcgcgggctggatgttgaaggagtgactcacgtatttaactatgatattccgcaagat
gtagagagctatgttcatcgcatcgggcgaacagggcgagccggggaagaaggagcggcc
tatacctttgcggcactgaaagacaaagacttattgaatgcccttgaaaaagggcttggc
cgtaaattggagcgaaaagaagtagaactgggcgacttgccggttgtcaaaaatagccgt
tcttctagtaaaaagaatcaccgcagaaaatag
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