KEGG   Cytobacillus kochii: CKF48_00170
Entry
CKF48_00170       CDS       T05194                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bko  Cytobacillus kochii
Pathway
bko02024  Quorum sensing
bko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CKF48_00170
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKF48_00170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bko03019]
    CKF48_00170
   03036 Chromosome and associated proteins [BR:bko03036]
    CKF48_00170
Messenger RNA biogenesis [BR:bko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CKF48_00170
Chromosome and associated proteins [BR:bko03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CKF48_00170
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ASV65872
UniProt: A0A248TCK8
LinkDB
Position
complement(29177..29407)
AA seq 76 aa
MKTSINIQDQFLNQLRKDNANVTVFLLNGFQIRGQVKGFDNFTVLFESEGKQQLVYKHAI
STFAPQRNVSLDMEQK
NT seq 231 nt   +upstreamnt  +downstreamnt
atgaaaacatcaatcaatatccaagatcaatttctaaatcaattgcgaaaagataatgcc
aatgtgacagttttcttgttaaacggtttccaaattagagggcaagtaaagggatttgat
aattttactgtcctatttgaatcagaaggaaaacaacaacttgtttataagcacgcgatt
tcaacatttgctcctcaacgaaatgtatcgctagatatggaacaaaaataa

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