Cytobacillus kochii: CKF48_00170
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Entry
CKF48_00170 CDS
T05194
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bko
Cytobacillus kochii
Pathway
bko02024
Quorum sensing
bko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKF48_00170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKF48_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bko03019
]
CKF48_00170
03036 Chromosome and associated proteins [BR:
bko03036
]
CKF48_00170
Messenger RNA biogenesis [BR:
bko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CKF48_00170
Chromosome and associated proteins [BR:
bko03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CKF48_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ASV65872
UniProt:
A0A248TCK8
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All DBs
Position
complement(29177..29407)
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AA seq
76 aa
AA seq
DB search
MKTSINIQDQFLNQLRKDNANVTVFLLNGFQIRGQVKGFDNFTVLFESEGKQQLVYKHAI
STFAPQRNVSLDMEQK
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcaatcaatatccaagatcaatttctaaatcaattgcgaaaagataatgcc
aatgtgacagttttcttgttaaacggtttccaaattagagggcaagtaaagggatttgat
aattttactgtcctatttgaatcagaaggaaaacaacaacttgtttataagcacgcgatt
tcaacatttgctcctcaacgaaatgtatcgctagatatggaacaaaaataa
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