Cytobacillus kochii: CKF48_00385
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Entry
CKF48_00385 CDS
T05194
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bko03016
]
CKF48_00385
Enzymes [BR:
bko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CKF48_00385
Transfer RNA biogenesis [BR:
bko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKF48_00385
Prokaryotic type
CKF48_00385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASV65913
UniProt:
A0A248TCM4
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All DBs
Position
complement(80700..81617)
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AA seq
305 aa
AA seq
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MEGILPLLKPKGMTSHDCVFKLRKILKTKKVGHTGTLDPEVTGVLPICIGRATKVAEYIT
DAGKEYEGEVTIGFSTTTEDASGEVVEEKKVDKPITREEIIAVFQQLTGEIVQTPPLYSA
VKVNGKRLYEYARLGQEVERPSRKVRIDRITLLNEQEVYNGERITFRFRVACGKGTYIRT
LAVMMGELLGYPAHMSDLTRIRSADFTIEDCLTLPQVEEVMNEGRIADVLKPLEWGISYL
PKYQINDKVAMKVKNGAVLPTPEELESVSGPIVMETVNNQALALYIHHPDKPGIIKPTKV
LYIGE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatattacctttattaaagccaaaaggaatgacttctcatgactgtgtattc
aagttacgcaagattctaaaaacgaaaaaggtgggtcacacaggaacattggaccctgag
gtaactggcgtattacctatttgtattggacgtgctacgaaggttgccgaatatattacg
gatgcaggtaaagagtatgagggagaggtcacaataggtttctctacaacgacagaagat
gcctcaggtgaagtggttgaagagaagaaggtagataaaccgattactcgagaagagatt
atcgcggtgttccagcaattaactggagagattgtccaaacaccacccctgtattctgct
gttaaagtgaatggtaaaagactttatgaatatgcacgactagggcaagaagtggagcgg
ccaagtagaaaagtgcgcattgatcgtatcaccttgctaaatgagcaggaagtatataat
ggggaacggattacttttcgttttcgtgttgcatgtggaaaaggaacatatattagaaca
ttagcagttatgatgggtgaacttcttggttatcctgcccatatgtctgatttaactcgc
atccggtctgcagactttactattgaggattgtttgacattaccacaagtggaggaagtg
atgaacgagggaagaatagctgatgtgctcaaacctttagaatgggggattagctatttg
ccgaaatatcaaataaatgataaagtagcaatgaaagtgaagaatggcgcagttcttcct
actcccgaagaacttgagagtgtatctggtcctattgtaatggagactgtgaacaatcaa
gcgttagccctttatatccatcatcctgataaaccaggtataataaagccaactaaagtt
ctatacataggtgaatag
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