Cytobacillus kochii: CKF48_02010
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Entry
CKF48_02010 CDS
T05194
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bko03009
]
CKF48_02010
Enzymes [BR:
bko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CKF48_02010
Ribosome biogenesis [BR:
bko03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKF48_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
ASV66209
UniProt:
A0A248TDH6
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All DBs
Position
complement(399127..400014)
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AA seq
295 aa
AA seq
DB search
MFTLQWQIDSLDTPVNIKSFLSQQNISKTALTDIKFAGGFIKVNGVEQNVRYMINNGDVL
EVGFPLEKRSEGLQPENIPLSILYEDDAVLIVVKPAGMSTIPSREHPGGSLANALLGYYI
NQGIESTIHIVTRLDRETSGLVLIAKHRHVHHLLSRQQQNNGVQRKYKAFVCGLMATKEG
WIEEPIGRKPDSIIERMVSPNGKHAVTYFKQLSQQKERQFTELELSLKTGRTHQIRVHLS
HIGFPLVGDNLYGGSTKLLQRQALHCFSLSFTHPISMEVLNFSIPYPEDMQALLS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtttactttacaatggcaaattgattcacttgatacaccagttaatatcaaatcattc
ctatcacagcaaaatatttctaaaaccgctttgacagatataaagtttgctggaggtttt
ataaaagtgaatggagtagaacaaaatgtgcggtatatgattaataacggcgatgtatta
gaggttggctttccacttgagaaaagaagtgaaggtttgcaacctgaaaatattcctctc
tccattctttacgaagacgatgcagtattaatcgttgtgaagccagcaggtatgagcact
attccatcgcgagaacatccaggtgggagtttagcgaatgccttattaggttattatatc
aaccaaggaatagagtccactattcatattgttacaagactggacagagagacgtcaggt
ttagtattaattgccaagcaccgtcatgttcatcatcttttaagtcgtcagcagcaaaat
aatggtgttcaaagaaaatataaagcttttgtttgtgggttaatggcaacaaaggaaggg
tggattgaggagccaattggcagaaaacctgatagcattatcgaaagaatggttagcccg
aatggtaaacatgcagtgacgtattttaaacaactatctcagcaaaaagaaagacaattc
actgaattagaattgtctttaaaaacgggcagaacccatcaaatacgagtgcacctatct
catatcggctttcctttagtaggagataatttatatgggggttcgaccaaattgctgcaa
cgtcaagccttgcattgtttttccctatcttttacccatcctatatcgatggaagtcctt
aacttttcaattccttatcctgaagatatgcaagcattactaagttaa
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