Cytobacillus kochii: CKF48_02370
Help
Entry
CKF48_02370 CDS
T05194
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_02370 (addA)
Enzymes [BR:
bko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKF48_02370 (addA)
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CKF48_02370 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Med15_M
ResIII
Rad54_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASV66280
UniProt:
A0A248TDU7
LinkDB
All DBs
Position
complement(473922..477659)
Genome browser
AA seq
1245 aa
AA seq
DB search
MPKSIIPPKPENLTWTDDQWKAIHATNQDILVAAAAGSGKTAVLVERIITKILNTDNPMN
VDELLVVTFTNASAAEMRHRIGEALEKAIQADPHSYHLRKQLTLLNKASISTLHSFCLEV
IKKYYYLINIDPGFRIADETEAQLLRDEVLDDLFEEAYGKEDNEAFYHLVDTFTNDRSDV
ALQDMIRQIYDFARANPSMDDYLDKMIEMYNVTPTANMGDIPFVGYLLSDVRLQLQGVRS
LLTHALELTKQPGGPAPRADNFVADIQLVDILIQAAEQSWETLYEAMQSYKFKTLKACKG
EEFEPELIEESKKVRDQAKDVLKKLKEELFSRKAESFLKDMLEMKPHIAGLAQLVKAFAE
RFAAVKTEKGLVDFADLEHYCLDILGVVDQFNQFIPTDAALAYKKQFKEVLVDEYQDTNM
VQEAILQLVTNDNELNGNLFMVGDVKQSIYRFRLAEPNLFLNKYNRFTTDGESTGLRIDL
ARNFRSRKEVLHGTNFIFKQIMGENVGEIVYDEAAELVPGAAYPEEVTHPIELTMIDLED
EDHTEQPDSFEEEELAQSQLEARLIAKKIRELMASHKQVYNAKLKQEQPMKYRDVVILLR
SMTWAPQMIEELKQQGIPVYADLSHGYFDATEVSIMMSLLKVIDNPYQDIPLAAVLRSPI
VGLTENQLATIRVPHQTGAYYEAVQQFCSEVQTGAKVAIYDKLKPFLLQLENWRQKARQG
ALSDLIWQLYRETRFYDFAGGMPGGKQRQANLRALYDRARQYEATSFRGLFRFLRFIERM
RERGDDLGAARALGEQEDVVRIMTIHKSKGLEFPFVFMPGLARNFNTMDLKKSFLLDKDL
GLAYKYVNANKRISLASLPQLAFKRKKKMEMLAEEMRVLYVALTRAKEKLFLIASPKNMA
KKLKDWQRVSRKSDWLLDDFTRAQSTSYLDWIAPAIIRHQDSATLDTSLSPVVAAIHNHP
SSWEVQIVAKEEAKAVIDENQNESDLLLEKVQQGERVDKKSRYYETIKHRLEWSYPYQSA
MKSRSKQSVSEIKRQKEIFSQEESGQELVKGFKKPILNRPLFMQEKSITPAERGTALHTV
MQHLDLHDPTDEKHITEKVEHLVRKELLTAEQATVIDPALIVDFLESELAERMRKAITLQ
REVPFNLALPASEVYSHWDQAEDTVLVQGIIDCLFEDHKGLVIVDYKSDRITDRFRGGID
EAAPILIDRYRVQIDLYTKAVEQITKRKVAQKYLYFFDGGYFLEI
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatctatcattccaccaaagcctgagaatcttacttggacagatgatcaatgg
aaagcgatccatgcgacaaatcaagatattctcgtagcggcagcagcaggatcggggaaa
accgctgtactagttgaaagaatcattaccaaaatattaaacactgacaatcccatgaat
gtcgatgagctccttgttgtcacatttactaatgcttcagcagcagaaatgcgtcataga
ataggagaagcgctagagaaggcaattcaagcggacccacattcctatcatttacgtaaa
caattaactttgctcaataaagcatccatctcaacgttgcattctttctgcttagaggta
ataaagaaatattattatttaatcaatatagacccaggatttagaattgcagatgaaaca
gaggctcaattattacgagatgaagttttagatgatttatttgaagaagcttatggtaaa
gaagataacgaagcattttaccacttagtggatacgttcacaaacgatcgcagtgatgtg
gcgcttcaagatatgattagacaaatctatgattttgctcgagcaaatccgtcaatggat
gattatttggacaagatgattgagatgtacaatgtgactcctactgcaaatatgggcgat
attccatttgtcggttatctcctctcagatgttcgcctgcaattacaaggtgtgagaagt
ttattaacccacgcacttgagttaacaaagcaacctgggggaccagcgccaagagcggac
aactttgtagcagatatccaactagtcgatatcttaatacaggcggctgagcaatcttgg
gagacattgtatgaggcaatgcagtcttataaatttaaaactttaaaggcttgtaaaggg
gaagagtttgagccagaactaatagaagagtcgaaaaaagtgcgagatcaagcgaaggat
gtcttgaagaaactgaaagaagagctttttagcaggaaagcagaatcttttctaaaagat
atgttagaaatgaagccacatattgcaggattagcacaattagtaaaagcatttgcagag
aggtttgcagcagttaaaacagaaaaaggactagtagacttcgctgatttagagcattat
tgtttggatattcttggggttgttgatcaatttaatcaattcattcctacagacgctgcc
cttgcctataaaaaacaatttaaagaagtgcttgtcgatgaataccaagatacgaatatg
gtacaagaggcgattcttcaactagtcacaaatgataatgagttaaacggaaacctcttt
atggttggagatgtaaaacaatcgatttatcgtttccgtttagcagaaccgaacttattt
ttaaacaaatataatcggttcacgactgacggtgaatcaacaggtttacgcattgatctg
gcgcggaatttccgcagtagaaaagaagtcctacatggcaccaattttatctttaagcaa
attatgggagaaaatgtaggggagattgtttatgatgaagcagctgaacttgttcctgga
gctgcttatcctgaagaagtgacgcatccgattgagttaacgatgattgatcttgaagat
gaagatcatacggaacaacctgattcgtttgaggaggaagagctcgcgcaatcacaatta
gaagcaagactcatagcaaagaaaattagagaattaatggctagccataaacaagtgtat
aatgcaaagcttaagcaagagcaaccgatgaagtatcgagatgttgtgattttattgcgt
tcaatgacatgggcaccacaaatgatagaggaattaaaacagcaaggtattcctgtttat
gctgatctttcacatggctattttgatgctaccgaagtttccattatgatgtcactctta
aaagtgatagataatccatatcaagatattccattagccgctgtattacgttcaccaatt
gttggtctaacagagaatcaattagcgaccataagagttcctcatcaaactggtgcttat
tatgaagcagttcaacaattttgttctgaagttcaaacaggagctaaggttgccatttat
gacaagctaaagccgtttttattgcagttagaaaattggcgacaaaaagccagacaaggt
gctttatctgatttgatttggcaattatatagagaaacacgattttatgattttgcaggt
gggatgcctggtggaaaacaacgccaagctaatttgcgcgccttatatgatcgggcaaga
caatatgaagctacatcatttagaggattgtttagatttttgcgctttattgaaagaatg
agagaaagaggagacgatttaggggctgcccgtgccttaggagaacaggaagatgtagta
cgtatcatgactattcataaaagtaaagggttagagtttccttttgtctttatgccaggg
ctagcacgaaactttaatacgatggatttgaagaagtctttcttgctagataaggatctg
gggttagcatataaatatgtgaatgcaaataaacggatttctcttgcttcgttaccgcag
cttgccttcaaacgtaagaaaaaaatggagatgcttgctgaagaaatgcgagtgctttat
gttgctttgacaagagcgaaggaaaagcttttcttgattgcttcaccgaaaaatatggct
aagaagttgaaggattggcaaagggtgtcgaggaagtcagactggctacttgatgatttt
actcgtgctcaaagtacaagctatttagactggatcgcacctgctatcatccgacatcaa
gatagcgcaactttagatactagtttgagtccggtagtagcagcaattcataaccatcca
tctagttgggaagttcaaattgttgcaaaagaagaagcgaaggcggttattgatgaaaat
caaaatgaatctgaccttctcttagaaaaagtacagcagggagaaagagtcgataaaaaa
tctcgttattatgaaacgattaagcatcgtctggaatggtcatatccttatcaatcagca
atgaaatcaagatcgaaacagtcagtttctgaaataaaaaggcaaaaagaaatcttttct
caagaggaaagtgggcaagaattagttaaagggtttaaaaagccaattttaaatcgaccg
ttattcatgcaagaaaagtccattacacctgctgaaagaggaacggccttgcatacagtg
atgcaacacttagacttacatgatccaacagatgaaaagcatataacggaaaaagtagaa
catctagtgagaaaagagctgttaacagctgagcaagctacggtcattgacccagctttg
attgttgacttccttgaaagtgagctagctgagcgtatgagaaaagcaataactttgcaa
agagaagtaccgtttaaccttgctttgccagctagtgaagtttactcccattgggatcaa
gcagaagatacggtattagtacaaggaataattgactgtttgtttgaggatcataagggc
cttgttatcgtggattacaaatcagatcgcattaccgatcgttttagaggcggaattgat
gaggcagcgccaattttaattgatagataccgagttcaaattgatttatacacgaaagcg
gtcgaacagataacaaaaaggaaagtcgcacaaaagtacctttatttctttgatggcggt
tattttttggaaatataa
DBGET
integrated database retrieval system
