Cytobacillus kochii: CKF48_02375
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Entry
CKF48_02375 CDS
T05194
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_02375 (addB)
Enzymes [BR:
bko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKF48_02375 (addB)
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CKF48_02375 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RIN1
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
ASV66281
UniProt:
A0A248TDJ6
LinkDB
All DBs
Position
complement(477652..481146)
Genome browser
AA seq
1164 aa
AA seq
DB search
MTVKMLIGRSQTGKTEKMVSEIKQLMKENPEGSPIIYIVPEQMTFQSEYKLASSKGLGGM
IRTQVFSITRLAWRVLQETGGISRYHLSSIGTNMLIRKIIEEQKDELKIFQNAADKNGFI
QQMESMLTEFKRYCVNPTELQMRIAQLQQNDHEKKVLAEKLHDLELIYSKFEAGILDKYL
DSEDYLQLLAEKANESVYLQKATVYIDGFHSFTPQEYRVIEALIRHCPNMTIALTLDQPF
DNEPPDALHLFRQTGETYQTILEIAKQQKHQVEYELLSQVPTNKHESLRHFEANFEVRPT
IPFSGEARVMIAHAMNRRAEIEGIARKVRALVRDEGLRYKDITVLMRNGHEYHDLITTVF
NDYEIPLFIDRKKSMLHHPVVEFIRSSLEVLMSNWRYEPVFRTIKTEMIFPLNYSSSLLR
EKMDRLENYVLSYGIQGSKWTKKERWKYRRIRGLEMTNTGQTDAERDIEEEVNQLRDIVA
APLLRLSRRMKKAETGREYAEALYLYLEETDIPAKIEKLQIETEERGELVRSREHNQAWN
AVVELLDEYVEMLGSEQMTTERFATILDAGIEALQFSIVPPAMDQVIAADMERSRVADMK
AAFIIGLNEGVLPAKFPEEGVLADDDREQLLSLGMKVAPSTKTRLLDEEFLAYKAFVTPS
DYLFVSYPMANEEGKALIPSPFIKRIQDQFVQIKEEYLMSDPAELNEEGQIDYISHINTA
LTFLTSQLQLQKRNYAIYDMWWDTYNIYLQKSGWQDITNKVLASLHYENRTEQLDEEISK
ALYGETIRASVSRMELFHSCPFSHYAQYGLRLRERQVFRLEAPDIGELFHAALKYITETV
MHKDLQWSDMTREQCELLAKEAVELLAPKLQHEILLSSNRYFYIKRKLEQIISRASFIMG
EHAKASGFTPVGLEMSFGPSGDWPSLSFPLKNGSMMELVGRIDRVDQAKGEKTGSYLRII
DYKSSEKDVNINEVYYGLSLQMLTYLDIVIAHSEELIGMKADPAGVLYFHVHNPMINSSK
MLGLDEIEKEILKKFKMKGLLLGEENVVRLMDKSLTTGDSPIISAGFNKDGSLSKRSKVA
DKAEFNYLRQFVRNKYIKTGNQMTGGQVEISPYKLKERTPCTFCSFKSICQFDESLETNT
FRLLDEKPRDEVLTRIREEAEKDA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaagatgttaattggtcggtctcagacaggaaaaaccgagaagatggtcagt
gagataaagcaacttatgaaagaaaatcctgaaggctcaccaattatttatattgttcca
gaacagatgacgtttcaatctgaatataaattagctagttctaaaggtttaggaggaatg
attagaacacaagttttttctatcacgagattagcatggcgagttctgcaagagactggt
ggaataagccgttatcatttaagtagtattggtacaaacatgctcattcgcaagattatt
gaggaacagaaggatgagctgaaaatttttcaaaatgcagctgataaaaatggctttatc
cagcagatggaaagcatgttaacagagtttaaacgctattgtgtgaaccctactgaatta
caaatgcgaatagcgcaattacaacagaatgatcatgagaaaaaagtgttagcagagaaa
ctgcatgatttagaattgatttattcgaagtttgaagccggtatattggataaatactta
gactcggaagactatttgcaattacttgctgaaaaagcaaatgaatcggtttatttgcaa
aaggcaacagtttatatcgacggttttcatagttttacaccacaggaataccgcgttatt
gaagcacttatccgtcattgtccaaatatgacaattgccctaacgttagatcagccgttt
gataacgaaccaccagatgccctccatttatttaggcaaacaggtgagacatatcaaaca
attctagagatagctaagcaacaaaaacatcaagtcgaatatgagttactttctcaagtt
ccgacaaacaagcatgaatcattgagacattttgaagccaattttgaagtgcgtccgact
atcccatttagtggggaggcacgggtcatgattgcccatgcaatgaatcgcagagcagaa
attgaggggattgcccggaaggttcgtgcccttgttcgtgatgaagggttaaggtataaa
gatataaccgtacttatgagaaacggtcatgaatatcatgatttaattacaaccgtgttt
aatgattatgagattcctttatttattgatagaaagaagtccatgttacatcatcctgtt
gtcgaatttattcgttccagtttagaggtgttaatgagtaactggcgatatgaacctgtt
ttccgtacgataaaaactgaaatgatttttccacttaactattcgtcttcattattacgt
gagaagatggaccggttagaaaattatgttttatcttatggcatacaaggtagtaaatgg
acaaagaaagagcgctggaaatatcggagaattcgtggccttgagatgacaaatacaggg
caaacagatgcagaaagagacatagaagaagaagtcaaccaattaagagatatcgtagct
gcaccactattgagactttcaaggcgaatgaagaaagcggaaacaggcagggaatacgca
gaagccctttatttatatttagaagaaacagatatcccagccaaaatagaaaaactgcaa
atagagacggaagaaagaggagagcttgttagatctagagagcataaccaagcatggaat
gcagttgttgagctattggatgaatatgtagaaatgcttggtagtgagcagatgacgaca
gagcgctttgcgacaatattagatgcaggtattgaagcactacaatttagtattgtacca
cctgcaatggaccaggtaattgctgctgatatggaaaggtcacgagtggctgatatgaaa
gctgcctttattattggtttaaatgaaggggttctaccagcaaagtttccagaagaaggt
gtattagcagatgatgatcgcgagcagttattgtcactaggaatgaaagtagctccttca
acgaaaacgagattgttagatgaagagtttttggcgtataaggcatttgtcacaccgtca
gattatttatttgttagctatccaatggcaaacgaagaaggtaaggcactcattccctct
ccatttataaagagaatacaagatcaatttgtacaaataaaagaagagtatttgatgtca
gatccagcagaactaaatgaagaaggacaaatagactatatcagtcatattaatacagca
ttaacgtttttaacatcgcaattacaattacagaaacgcaattatgccatttatgacatg
tggtgggatacgtataatatttatttacagaaatcaggctggcaagatatcacaaacaag
gttttagcaagtttacattatgagaataggacagaacaactagatgaagagattagtaaa
gcattgtatggtgaaacgattcgtgcaagtgtatcaagaatggaactctttcatagctgt
ccgttctcacattatgcccaatatggtttgcgtttgagagaacggcaagtctttcgatta
gaagcacctgatattggtgaattatttcatgccgccctaaaatatataaccgaaacggtt
atgcataaggacttgcaatggtcagatatgacaagggaacaatgcgaattacttgcaaaa
gaagccgttgaactacttgcacctaaattacagcatgaaatcctcctaagctctaatcga
tacttctatattaagcgaaaactggagcaaatcattagccgtgcatcctttattatggga
gaacatgcaaaagccagtggattcacacccgtcggtttagagatgagctttggaccttct
ggtgattggccatctctatcttttccattgaaaaatggcagtatgatggaactagtggga
cgcattgatcgtgttgatcaagcgaaaggtgagaagacaggatcgtatttacgcattatt
gattataagtcaagtgagaaagacgtgaatattaacgaggtatattacggattatcgtta
caaatgttaacctatttggatattgtcattgcccattcagaggaactcatcggtatgaaa
gctgatccagcgggtgttctgtattttcatgttcataatccaatgattaactcaagcaaa
atgcttggtttagacgagatagaaaaagagatcttgaaaaagttcaaaatgaagggatta
ttattaggagaagaaaatgttgtacgtttaatggacaagtctttaacaacaggcgattcg
ccgattatttctgctggctttaataaagatgggtcgctatcaaagcgatccaaggttgct
gataaagcggaatttaattacttgcgacaattcgtgagaaataaatatattaaaacgggt
aaccaaatgactggtggtcaagtggagatatcaccatataaattgaaagaacggacgcca
tgtacattttgttcttttaaatccatctgtcaatttgatgagtcattagaaacgaataca
tttagattattagatgaaaaaccgagagatgaagtgctaactcgaataagagaggaggca
gaaaaggatgcctaa
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