Cytobacillus kochii: CKF48_07140
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Entry
CKF48_07140 CDS
T05194
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bko03009
]
CKF48_07140
Ribosome biogenesis [BR:
bko03009
]
Prokaryotic type
ribosomal protein modification factors
CKF48_07140
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GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ASV67126
UniProt:
A0A248TG05
LinkDB
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Position
complement(1417990..1419918)
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AA seq
642 aa
AA seq
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MIVIVGNGKLADFVYRQLSSNYTVARQDLLMDFPEDTTLALVLHDNWQPSVHQQAEEKFR
RENIPWLRGFVSFGEGIIGPFVQPGKRGCSRCADVRRIIGGTDSKEMWGLYYKLSGESRP
QDAWASRTGLWQMTTLLCTEVDYILQGEINHLENQLFITNLKTFMHSSHHFSFDPMCPIC
GDIPEDSAELAEIKLQSSPKIQGAGYRSRSIEELETVLLRDYYDHRTGVINGKIQDWTLP
FADVLMNMPLFGASEGVAGRSNSYRMSELTAILEGLERYCGIEPRGKRRVVRGSYLDVMD
QALNPSTVGLHSPEYYENPHFPYQSFEPNKPMNWVWGYSFLQERSILVPELLAYYSLGCG
EGFVYETSNGCAIGGSLEEAIFHGVMEVVERDSFLLTWYAKLPLPRLDLSSADDKELQLM
VDRVREVAGYDLHFYNSTMEHGIPSVWAVAKNRKETGVNIICAAGAHMDPVRAVKSAIYE
LAGMMFVHDEKLATNRQKYEEMLEDPFKVRTMEDHGMLYGLPEAEEYLTFILNNQGPLRT
FAEEFKKPPVYNDLKDDLHEVLQTFRENNLEVIVVDQTTPIIQENGLYCVKVIIPGMLPM
TFGHHLTRVKGLDRVLKVPKQLGYRKKHLSYEELNPLPHPFP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcatcgtcggtaatggtaaactggccgattttgtctataggcaattgtctagt
aattatacagtcgcgcggcaagatctattaatggatttccctgaagatacaacattggcg
ctcgtattgcatgataattggcagccctccgttcatcaacaagcagaagaaaaattcaga
agggaaaatattccatggctccgtggctttgtttcttttggtgagggaattattggtcca
tttgtacaaccgggaaaacggggatgttcacgttgcgccgatgtaaggcgcatcatagga
ggtacagattctaaagaaatgtgggggctttattataaattatcaggagaaagtcgcccg
caagacgcatgggcatcacgaacgggactttggcaaatgacaactttattatgtacagaa
gtggattatattcttcaaggagagatcaatcatttagaaaatcaactgttcattacaaat
cttaaaacgttcatgcattcatctcatcatttttcctttgatccaatgtgcccaatatgt
ggagacattccagaagattcagcggaattagcagaaattaagttgcaatctagtccgaaa
attcaaggtgctggttatcgcagtcgttcaattgaagaattagaaaccgtgctattaaga
gattattacgatcatcggacgggggtaatcaatggaaaaatacaggattggacacttcct
tttgctgatgttcttatgaatatgccactgtttggtgcaagcgagggagtggctggaaga
tctaactcttatcgaatgagtgagttaacagctattttggaaggcttagaacggtattgc
ggtatcgagcctaggggaaaaagaagggttgtacgaggaagttatctagatgttatggat
caagccttaaacccttcaactgttggtttacactcacctgagtattatgagaatcctcat
tttccgtatcaatcattcgaacctaataaaccaatgaactgggtttggggttattcattc
ttacaagaacgatctattcttgtcccagaattacttgcttattacagtttaggttgtggg
gaaggttttgtttatgagacttcaaacggatgtgcaatcggaggtagcctggaggaagct
atttttcatggagtaatggaagtcgttgagcgagattcctttttactcacttggtatgcg
aaactgccattgccacgtcttgatttaagttctgcagatgacaaggaattgcaattgatg
gttgatcgggtacgtgaggtggcagggtacgaccttcatttttacaattcgacgatggaa
catggtatcccaagtgtgtgggcagtagcaaaaaatagaaaagaaacaggtgtaaatatt
atttgtgctgcaggtgctcatatggacccagtaagggctgtcaaaagtgccatctatgag
ctagcgggcatgatgtttgttcatgatgagaaattagcaacaaataggcagaaatacgag
gagatgcttgaagatccgtttaaagtaagaacaatggaggatcatggtatgttgtacggt
ctacccgaggcggaagaatacctaacgtttattttgaataatcaagggccattacgtaca
tttgctgaagaattcaagaagccaccagtatacaacgatttgaaagatgaccttcacgaa
gttcttcagacgttccgtgaaaataatctagaagtgattgtcgttgaccaaacaacacca
attattcaagagaatggattgtattgtgtgaaggtcattattcctgggatgttgccaatg
acatttggtcatcacctgacacgggtgaaaggattagatagagtactaaaggtgccaaag
cagctagggtataggaagaagcacttatcgtatgaagagctgaacccacttcctcacccg
tttccgtaa
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