Cytobacillus kochii: CKF48_07180
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Entry
CKF48_07180 CDS
T05194
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bko
Cytobacillus kochii
Pathway
bko03420
Nucleotide excision repair
bko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKF48_07180 (pcrA)
03430 Mismatch repair
CKF48_07180 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_07180 (pcrA)
Enzymes [BR:
bko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKF48_07180 (pcrA)
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKF48_07180 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CKF48_07180 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
Neural_ProG_Cyt
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASV67133
UniProt:
A0A248TG22
LinkDB
All DBs
Position
complement(1428128..1430356)
Genome browser
AA seq
742 aa
AA seq
DB search
MQYLSNKLLNGLNKEQQQAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMRDRIRAMMGGVAEEIWISTFHSMCVRILRRDIDRIGFNRNFTILDSTD
QQSVIKNILKERNLDPKKFDPRAILGTISSAKNELIEPEEFAKTAGDYFSQVTSDVYTDY
QKRLRKNHALDFDDLIMKTIQLFNRVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLLA
NRFQNICVVGDSDQSIYRWRGADIANILSFEKDYAQAQVILLEQNYRSTQRILNAANGVI
DKNMNRKAKNLWTENPEGNKIQYYRADSEQGEGQFVVSKIKELAQSQNRKLADFAILYRT
NAQSRVMEEMLLKSNIEYAIVGGIKFYDRKEIKDVLAYLRLIANPDDDISLQRVINVPKR
GIGSGSVDKIANFATMHDMTMFEALESIELIGLSPKITKSAIEFRDLVKNYTQMQEYLSV
TELVEELLDKSGYRDMLKAEKSIESQSRLENLDEFLSVTKNFEDASEDKTLVAFLTDLAL
VADIDKLDDDGEKADAVVLMTLHSAKGLEFPVVFLMGMEEGVFPHSRSLMEEAEMEEERR
LAYVGITRAEEQLFITNAQMRTLFGRTNMNPPSRFIQEIPADLLEGLEPKAKPLNRGQST
FNSSSGNRMQPARKAVVRPAVQNTGGSGMNWIVGDKAVHGKWGTGTVVSVKGEGDGMELD
IAFPKPVGIKRLLAKFAPISKG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatttatctaataaattattaaatggtttgaataaggagcagcaacaggctgta
aaggcaacagatggacctttgcttattatggctggagcaggaagtggtaagacgcgtgta
cttacccatcgcattgcttatttaatggtagagaagggcgtgaatccatataatatttta
gcaatcacgtttacgaataaggccgcaagagaaatgagagatcgtattcgtgcgatgatg
ggcggtgtggctgaagaaatctggatttctacttttcactctatgtgtgtgagaatatta
cgtcgtgatattgatcggattgggttcaatcgtaacttcacaatattagattctactgat
cagcaatctgttattaagaatatcttaaaagagcggaatttagatccgaaaaagttcgat
cctagagcaattttagggacgattagttctgcaaaaaatgaactaattgaaccagaggaa
ttcgccaagactgccggtgattatttctcccaagtgacaagtgatgtgtatacagattat
caaaaacgtctgcgaaagaatcatgcattagactttgatgatcttattatgaagacgatt
caattatttaatcgcgtccctgaggtattagaatactatcaacgtaaattccagtatatt
catgtggatgaatatcaagatacgaatagagcgcaatacatgctagtaaaattattagcg
aatcgtttccaaaatatatgtgtggttggagactcggatcaatctatttatagatggcgc
ggggcagatattgccaatatcttatcctttgaaaaagattatgcgcaagcacaagtcatc
ttgctagaacaaaactatcgatccacacaaagaattttaaacgcagctaacggtgtcatt
gataaaaacatgaatcgtaaagcgaaaaacttatggacggaaaatcctgaaggaaataaa
attcagtattaccgtgcagatagtgagcaaggcgaaggacaatttgtcgtaagtaaaata
aaagaattagcgcaaagtcagaatcgtaagcttgccgattttgctattctatatcgcaca
aatgcccaatcccgggtcatggaggaaatgctattaaagtcgaatattgaatatgcgatt
gttggcggaattaagttctatgatcgtaaagaaattaaagatgtattggcttatttacga
ttaattgccaaccctgatgatgatattagtctacagcgagtgattaatgtgcctaaaaga
gggattggttctggatcagttgataagattgctaattttgcaaccatgcatgatatgaca
atgtttgaagcactcgaatccatcgaattaattggcttaagcccaaaaatcacaaaatct
gctatagagtttcgtgatttagtaaagaattatacacaaatgcaagaatacttatctgtg
acagaattggtagaggaactgttggacaagtcaggctatcgtgacatgttaaaagcggag
aaatcgatcgagtctcaaagtcgtttggaaaacttagatgagtttctatctgtaacgaag
aattttgaagatgcgtccgaagataaaacacttgttgccttcttaacagatttggcgctt
gttgccgatattgataaattggatgatgacggtgagaaagcggatgcagttgtattaatg
acgcttcactctgcaaagggattagaatttccagttgtctttttaatgggtatggaggaa
ggtgtattccctcatagccgttcattaatggaagaagcagaaatggaagaggaacgtcgc
cttgcttatgtagggattacgagagcagaagagcagttatttataacaaatgcgcaaatg
cgtacactatttggccgtacaaacatgaacccaccgtccagatttattcaggaaattccg
gctgatttattagaaggattagagccaaaagcaaaaccccttaatcgaggtcagtccacg
tttaatagttcttcaggaaatcgtatgcaacctgctcgtaaagcggttgttcgcccagct
gtacaaaatacaggtggtagcggtatgaattggatagttggagataaagctgtgcatggt
aaatggggtactggaacagttgtaagtgtcaaaggtgaaggtgatggaatggagcttgat
attgcttttccaaagccagtaggtattaaaagattacttgctaaatttgccccgatttcg
aaaggttaa
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