Cytobacillus kochii: CKF48_11955
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Entry
CKF48_11955 CDS
T05194
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bko
Cytobacillus kochii
Pathway
bko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKF48_11955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_11955
Enzymes [BR:
bko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CKF48_11955
DNA repair and recombination proteins [BR:
bko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKF48_11955
Prokaryotic type
CKF48_11955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Mob_Pre
Motif
Other DBs
NCBI-ProteinID:
ASV67959
UniProt:
A0A248TIJ8
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All DBs
Position
2327830..2328495
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AA seq
221 aa
AA seq
DB search
MNSDWQKRLSPEKEKPYFQKLMSFLEQEYRNHTIYPVKGNIFNALEYTSFEETKVVILGQ
DPYHGANQAHGLSFSVQPGVKIPPSLRNIYKELEADIGCPIPNHGCLISWAKQGVLLLNT
VLTVREGEANAHRGQGWEEFTNYIITSLNHREKPIIFVLWGKPAQAKLKLINTEKHATIL
APHPSPLSAHRGFFGSKPFSKINQKLLEWGEKPIDWKIDNL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggattggcagaaaagactttctccggagaaagaaaagccttacttccaaaag
ttgatgagctttttagaacaggaatatcggaatcatacgatttatcctgtaaagggaaat
atctttaatgcattggaatatacaagctttgaagagacaaaagtggttatccttggtcaa
gacccatatcatggtgccaatcaggcgcatggcttaagcttttcggtacaacctggtgtg
aaaattccgccctctctacgaaatatatataaagaattagaagcagatattggttgtccc
atacctaaccatggttgcctcatttcttgggcgaagcagggggtattattattaaatacg
gtattaacagtaagagaaggagaggccaatgctcatcgtggacaagggtgggaagagttt
acgaattatattattacttctttaaatcatagagagaagcctattatttttgtgttgtgg
gggaagcccgcgcaagcgaagttaaagttaattaatacagaaaaacatgccactatcctc
gcgccccatccgagtccgttatctgctcatagaggcttctttggtagcaagccattctca
aaaattaatcaaaaattgttagaatggggagagaaaccgatagattggaaaatagacaat
ttataa
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