Cytobacillus kochii: CKF48_13760
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Entry
CKF48_13760 CDS
T05194
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bko
Cytobacillus kochii
Pathway
bko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKF48_13760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_13760
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKF48_13760
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKF48_13760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_19
AAA
AAA_7
AAA_30
AAA_22
P-loop_SecA
CFAP141
PMT2_N
TrwB_AAD_bind
DUF87
AAA_16
UB2H
HEM4
UFL1
AAA_5
DUF7018
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ASV68296
UniProt:
A0A248TJB0
LinkDB
All DBs
Position
2697669..2699648
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AA seq
659 aa
AA seq
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MDQTFELVSKYSPQGDQPAAIKELVNGIQEGKKHQTLLGATGTGKTFTVSNVIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSSLFERNDVIIIASVSCIYGLGSPEEYRELVLSLRTGMEIERNQLLRKLVDIQ
YERNDMNFIRGTFRVRGDVVEIFPASRDEHCLRVEFFGDEIDRIREVDALTGEILGDRDH
VAIFPASHFVTREEKMRVAIENIEKELEERLATLHEEGHLLQAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGSTPYTLLDYFPKDFLLVIDESHVTLPQIRGMYNGDQARKNV
LVEHGFRLPSAMDNRPLTFSEFEDHISQIVYVSATPGPYELEQTPEMIEQIIRPTGLLDP
IIDVRPIEGQIDDLIGEINDRIEKNERVLITTLTKKMSEDLTDYLKEIGMKVQYLHSEVK
TLERIEIIRELRMGTYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGQVIMYADRMTDSMTKAISETKRRRSIQEDYNTEHGITPQTIQKEIRDVIRATQ
AAETPEEYNSADKLSQLNKKERQKLIADMEKEMKTAAKDLNFERAAELRDLILELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttggatcaaacatttgagttagtttcaaaatattccccacaaggtgatcaacctgcagct
attaaagagcttgtaaatgggattcaagaggggaaaaagcatcagacattactaggtgca
actggaaccgggaaaacgttcactgtttctaacgtcattaaagaagtgaataaaccaacg
ttagtaattgctcataataagacgttagcaggtcaattatatagtgaatttaaagagttc
tttcccaataatgcggtagagtattttgttagttactatgactactatcaaccagaagca
tatgtaccatccactgacacatttattgagaaagatgcgagtattaatgatgaaatagat
aagctccgccattcagctacctcctcattatttgaaagaaatgatgttatcatcatcgcc
agtgtttcttgcatctatggtttgggatctcctgaggaatatagagagcttgtcttaagt
ttaaggacgggaatggaaatagagcgaaatcaattattaaggaagctagtcgacatacaa
tatgagcgcaatgatatgaactttatacgtgggacatttcgtgtacgcggtgatgtcgta
gagatattccctgcttcgagagacgagcattgtttacgtgtggagttttttggagatgaa
atagatcggattcgtgaagtcgatgctttgaccggtgaaattttaggtgatcgtgatcat
gtagccattttcccggcatctcacttcgttaccagagaagagaaaatgcgtgtagccatc
gaaaatattgaaaaagaattagaagaaaggctggctaccttacatgaagaaggccattta
ttacaggcacaacgcctagaacaaagaacgcgatatgatctagaaatgatgagagagatg
ggtttttgttcagggattgaaaactactcccgtcatttaactcttcgtccagctggttcg
actccttatactttacttgattacttcccaaaggacttcttacttgttattgatgaatct
catgtgacattgccgcaaataagagggatgtataatggtgaccaagcccgtaagaatgta
ttagtagaacatggttttcgtcttccttctgcaatggataaccgtcctcttactttttct
gagtttgaagatcatattagccagattgtttatgtttctgcgactccaggtccgtatgaa
ttagaacaaacacctgaaatgattgaacaaatcattagacctactggattgttagatcct
attattgatgtccgaccgatagagggacagattgatgatttaattggtgaaattaatgat
agaattgagaaaaatgaacgtgtactcattaccactttaacgaaaaaaatgtctgaggat
ttaacggattatttaaaggaaattggtatgaaggttcaatacctacattccgaagtgaaa
acccttgagagaatcgagattattagggagcttcgtatgggtacctatgatgtgttaata
ggtattaatttgttgcgagaagggcttgatattccagaagtttcactcgtagcgattctt
gatgccgacaaagaaggatttttacgttcagaacgttcacttatccaaacgattgggcgt
gctgctcgtaatgcaaatggtcaagttataatgtatgctgaccgaatgacagactccatg
acaaaagctataagtgaaacaaaacgccgccgtagcattcaagaagattacaacacagaa
cacggtatcacgccacagacgatacaaaaagaaattcgtgatgtgattagagcgacacaa
gcagcggaaacgccagaggagtataatagtgctgataaattaagtcaattaaataaaaaa
gaacgtcaaaaattaatagcagatatggagaaagagatgaagactgcagcaaaggattta
aatttcgaacgagcggcagagcttcgtgatcttattcttgaactgaaggcggaaggatga
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