Cytobacillus kochii: CKF48_13950
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Entry
CKF48_13950 CDS
T05194
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bko
Cytobacillus kochii
Pathway
bko02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKF48_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bko03000
]
CKF48_13950
Transcription factors [BR:
bko03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKF48_13950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_10
HTH_19
XH
TPR_2
Zn_ribbon_double
CHD5
Motif
Other DBs
NCBI-ProteinID:
ASV68331
UniProt:
A0A248TJJ4
LinkDB
All DBs
Position
2736936..2738168
Genome browser
AA seq
410 aa
AA seq
DB search
MEGKIIKYYREAKKLTQKEIVQGICSITHLSKIERESTQYSSEIIYMLCERLEINMEDEI
ERFQQFKRKMTDLQKQIIIQDDERIEQLKKELTANSLRKVPDFQASYFLTMARYFLYKMK
VTEAYYFINQLQKEVIELTSFEENSLKHQLGIYYFLTGRNKDCIRELSSIDHDSYHQNEY
YYHLALAYYAANQNVQAYYYGKKAADYFHSTMNVNRMIDSETLLLVQLNAKGAHDFKETK
DRYEALFRLCEECGEVERKAKVYNNFAYDLHKRKKYTEAHYYYLKALEIACENSPLYAMF
LENYIHNGFISGLVHKKELLQEVRKGIELAKTYQWSGPFTFEFYSFLIEGREEEAYAIIE
NKLLPYYRQSGDTLMIEKYEQRLFAYYRKIGDVENAFKLAKSLIASPTLV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaaatcatcaaatactatcgagaagcaaagaagcttacacagaaggagatt
gtacaaggcatttgctctatcacccatttaagtaaaattgaaagagagtctactcaatac
tccagtgaaattatttatatgctttgtgaacggttggaaattaacatggaagatgaaatt
gaacgatttcagcaatttaagcgaaagatgactgacctccaaaagcaaattattattcaa
gatgatgagagaattgagcaattaaagaaagagttaacagcaaactcgttaagaaaagta
cctgattttcaagcgagttactttttaacaatggcgaggtacttcttatataagatgaaa
gtgacagaagcttattactttatcaaccaacttcaaaaggaagtgatagagctaacctct
tttgaagagaattcattaaagcatcaattagggatatattattttttaacggggagaaat
aaagactgtattcgagaattaagttctattgaccatgatagctatcatcaaaatgaatat
tattaccatctagcactcgcttattatgctgctaatcagaacgtacaagcctattattat
ggtaaaaaagctgctgattattttcattcaacgatgaatgttaatcgcatgatagattcg
gaaacattattacttgtgcagttaaatgcgaaaggtgctcatgattttaaagagacgaaa
gataggtatgaggctctttttcgtttatgtgaagagtgtggcgaagtagagagaaaagca
aaggtatataacaacttcgcttatgaccttcataaaaggaaaaaatacactgaagcacac
tattactatttgaaagcattagaaattgcttgcgaaaactctccattatacgccatgttt
ttagaaaattatattcataatggttttattagtgggttagtacataaaaaggaattgtta
caagaagtaagaaaagggattgaattagcaaagacttaccaatggagtgggccttttaca
tttgagttttactccttcttaattgagggcagagaagaggaagcatacgccataatagaa
aataaattattaccttattatcgtcagtcgggtgatacgcttatgatagaaaaatacgaa
caacgtttattcgcttattataggaaaattggtgacgttgaaaacgcgtttaaattggca
aaaagtttaattgcttcaccgacattagtttaa
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