Cytobacillus kochii: CKF48_16430
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Entry
CKF48_16430 CDS
T05194
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bko
Cytobacillus kochii
Pathway
bko03030
DNA replication
bko03430
Mismatch repair
bko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKF48_16430
03430 Mismatch repair
CKF48_16430
03440 Homologous recombination
CKF48_16430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bko03032
]
CKF48_16430
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_16430
Enzymes [BR:
bko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKF48_16430
DNA replication proteins [BR:
bko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKF48_16430
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKF48_16430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
FKBP26_IF
Motif
Other DBs
NCBI-ProteinID:
ASV68731
UniProt:
A0A248TKP9
LinkDB
All DBs
Position
3213264..3216626
Genome browser
AA seq
1120 aa
AA seq
DB search
MSFIHLQVYSAYSLLMSTASVEQLVADAKVKGYPAIALTDRNVMYGTAQFYNECKKNNIK
PIIGLTVDIEKEQEEGTNPIVLLAKNNQGYQNLLKITSSLQTAAEGGLPLKWLRAYSNGL
IALTPGLEGVIENYLLEDRFMDAEKYARMYKEIFSGDFYLSMQRHGLTEEEKVLPLLKDL
SEQSDISLVVTNAVHYLNKEDAFAQQCALAIRNGEKLEDESWERLQSDQYSLKRVKEMVD
LFVEEEEAIIKTNMIASECDVEMDLGIKSLPKFPTDGHLTADQQLEQLCMKGWGERYPDG
NEKARNRLMYELSILKKMNFSDYFLIVADFMQFCRREKIFTGPGRGSAAGSIVAYVLYIT
DVDPIRYNLLFERFLNPERISMPDIDIDFPDHRRDEVIQYVASKYGQQHVAQIITFGTLA
AKAALRDVGRAFGLNSKELDQLSRAVPSRLGITLKSAWQESHSLQTLINQSSLYKRLFNT
ALKLEGLPRHTSTHAAGVIISERPLVQVVPITGGHGDVFLTQFSMEHLEDRGLLKMDFLG
LRNLSLIENILQSIKKKTGKLIPIKEVPLQDQKAYELLSRGETTGIFQLESSGMRNVLKK
LQPTTFEDIVAVNALYRPGPMENIPLFIARKHGEEEITYPHQDLEDILKPTYGVIVYQEQ
IMQIAAKMAGFSLGEADLLRRAVSKKQEEVLNKERAHFVHGAINQGYTEETANQIYNYIV
KFANYGFNRSHAVAYSMISYQLAYLKAHYPLHFMAALLTSAIGNDAKVAQYVNEAKQLGI
EILPPSINKSIFSFQVENQGIRYSLAAVKTIGVNAWKEIVRVRAGRSFQDLFDFCIRMSG
KVFNRRMLEMLVHSGSFDEFGEDRATLLASLDIALEHAELVQPDDDQFDMFSEEEFFPKP
KYATVEEIPLLDKLANEKAALGLYLSAHPVTTYESFFSLLKSQTLQYIESQERKVIVQSV
VYISEMKKIRTKKGEAMAFLLLSDQTGDMEAVAFPKIYNKYSSIMQAGDIVFMKGEVEVR
NGKKQWIIRSVEKVEEVIEKEESKPPTLYIKITKENESDEKLTLLKEILQYEVGQSPVVL
FYENDRRSIKLSQDEYVSYSEKLTERLKELFGGENIVFKR
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttattcacttgcaagtatatagtgcctatagtttattaatgagcacagctagt
gttgaacaactcgtagcagatgccaaagtaaaagggtatccagcaattgcccttacagat
agaaatgtaatgtacgggacagcacagttttataatgaatgtaaaaaaaataatattaaa
cctattattgggttgactgtcgatattgaaaaggaacaagaagaagggacgaacccaata
gtattactagcgaaaaataaccaaggttatcaaaacttactcaaaataacgagtagcctg
caaacggcagcagaaggcggactcccgctcaagtggttgagggcttactcaaatggatta
attgctttaacacctggtttagaaggcgtaattgagaattacttgctagaagaccggttt
atggatgctgaaaaatatgctcgtatgtataaagagattttttctggtgacttttatctt
tctatgcaaagacatgggctaacagaggaagagaaagtattgccgttgcttaaggattta
tcagagcaaagtgatatatcactagttgtgacaaatgctgttcattatttaaataaagaa
gatgcctttgctcaacaatgtgcacttgctatacgcaatggagaaaaattagaagacgag
agttgggaaagattacaatctgatcaatattctctaaaacgtgtgaaagaaatggttgac
ctttttgtagaagaggaagaggcgattataaagacgaatatgattgccagtgaatgtgat
gtggagatggaccttggaataaaaagcttgccgaaattccccactgatggccatctgaca
gccgatcagcaattagagcagctctgtatgaaagggtggggtgagagatatcctgatgga
aatgagaaagctaggaatcgccttatgtatgagctttctattttgaagaaaatgaatttt
agtgattattttttaattgttgcggattttatgcagttttgtagaagggaaaaaattttc
actggacctggacgtggttcggcagccggctcaattgtagcatatgtgctttatataaca
gatgttgatccgattcgttacaatttgctttttgaacggtttttaaaccctgagcggatt
tctatgcctgatattgatattgattttcctgaccatcgcagagatgaggtaatccaatat
gtggcaagcaagtatggtcagcaacatgtcgcgcaaattattacgtttggaacattagca
gctaaggcggcacttagagatgttggtagggcctttggcttaaactcaaaggaactagat
cagctatctcgtgcggtacctagtcgactaggtattaccttaaaatcagcttggcaagag
tcacattctttgcaaacattgattaatcaatcatcgttatataaaagattatttaataca
gcactaaagttagaaggattgccaagacatacttctacacatgctgctggcgttatcata
agtgagcgcccacttgttcaagtggtaccaattaccgggggacatggagatgtttttcta
acacaattttcaatggagcacttggaagatcgtggcctattaaaaatggattttcttggc
ttacgtaatttgtcacttattgaaaatattttacagtctattaaaaagaaaacaggaaaa
cttattccaataaaagaagtgccacttcaagaccaaaaagcttatgaattactatctagg
ggagaaacaacaggaatttttcagttagaatcaagtgggatgagaaatgtattaaagaaa
ctgcaaccgactacatttgaggatattgttgcagtcaatgcattatatcgcccaggcccg
atggaaaatattccgttatttattgcgagaaagcatggtgaggaggaaattacctatcct
catcaagatttagaagatatattgaagccgacttatggtgtcattgtttaccaagaacaa
attatgcagattgcagcaaagatggcaggattttcactaggggaagctgacttattaaga
agggctgtaagtaaaaagcaagaagaagttctgaataaagaaagagcacattttgtgcat
ggtgcgattaaccaaggatatacagaagaaactgccaatcaaatatataattacatcgtt
aagtttgctaattacggatttaatagaagtcatgcagtagcgtatagtatgatttcttat
caacttgcctatttaaaagcccattatccgctacatttcatggcggcattgttaacttca
gctattggtaatgatgcgaaagtagcccaatatgtaaatgaggcgaagcaattggggatt
gagatcttacctccttccattaataaaagtatcttttcttttcaggtggaaaatcaagga
atccgctatagtttagcagcagtgaagacgatcggggtaaatgcttggaaggaaattgtt
cgagtgagagcaggtagatcattccaagatttatttgatttttgtatccgtatgtcaggg
aaagtattcaataggcgaatgcttgaaatgcttgttcattccgggagttttgatgagttt
ggtgaggaccgagcgacactacttgctagcttagatattgccttagagcatgccgagtta
gttcagccagatgatgatcaatttgatatgtttagtgaagaggaatttttccctaaacca
aaatacgcaactgttgaagagattcctttgttagataaacttgctaacgaaaaggcggct
ttggggttatatctttctgcgcatccggtaacaacctatgaatcatttttttcactgtta
aaatctcaaacgctacaatacattgagagtcaagagagaaaagtaattgttcaatcagtc
gtgtatatctcagaaatgaagaagattaggaccaaaaaaggagaagcgatggcattttta
cttcttagtgatcaaactggagatatggaagcagtcgcttttccgaaaatctataataag
tattcttctatcatgcaagctggcgatattgtctttatgaaaggtgaagtagaggtaagg
aatggaaagaaacaatggattattagaagtgttgaaaaagtagaagaagtgattgaaaag
gaggaatctaagccacctaccctttacattaagattacgaaagagaatgaatcagatgag
aaattaacattgttaaaagaaattttacaatatgaagtagggcaatcacctgtcgtttta
ttctatgaaaatgatcgtagatccatcaaacttagtcaagatgaatatgtatcatacagc
gaaaaattgactgaacgcttaaaagaattatttggaggagagaatattgtttttaagcgt
tag
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integrated database retrieval system
