Cytobacillus kochii: CKF48_17330
Help
Entry
CKF48_17330 CDS
T05194
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bko
Cytobacillus kochii
Pathway
bko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKF48_17330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_17330
Enzymes [BR:
bko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CKF48_17330
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKF48_17330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_12
T2SSE
AAA_28
AAA_22
nSTAND3
TsaE
AAA_16
NTPase_1
AAA
AAA_17
UvrD_C
AAA_18
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ASV68899
UniProt:
A0A248TL98
LinkDB
All DBs
Position
3410421..3412820
Genome browser
AA seq
799 aa
AA seq
DB search
MDEQNSLDLFAEQKTYVKGKHLVTIFHNESNLYTVLRIRVLETNAQYEEKEAVITGYIPK
IHEEETYTFLGEWKEHPKFGLQFHVEQYKKEMPQTKEGVVNYLSGDLFKGIGKKTAQSIV
DELGENAINSILNNPSLLDGIPKLASEKAKVLYDTLVENQGIEQVMIHLNQLGFGPQLSM
KIFQTYKDQAIDILQKKPYQLVEDIEGIGFHRADEIGQQVGMSGSHPDRIKAACLYVLDS
ESAQAGHVYAEAEELLPAVKKLLEEKATEVIPYEAISEAILKLGEERKVIAEGQQLYLPS
LFFSEKGIVTNIKRILNQTEFNEQFPESEFLLALGQLEERLSVQYAPSQKDAIQKALMSP
MMILTGGPGTGKTTVIQGIVELYGELHGCSLNPKDYKKEEPFPFLLAAPTGRASKRMAES
TGLPAVTIHRLLGWNGSEGFDHHEENPLEGKILIVDETSMVDIWLANQLFKAIPEEMQVI
LVGDEDQLPSVGPGQVLRDLLLSERIPSVMLTDIYRQSEGSSIIELAHEMKKGRLPQNIT
QQQKDRSFFQCQPGQIGTVIGQVVRNAKKKGYLAKDIQVLAPMYRGPAGIDRLNKMIQEI
FNPNEDGSRKEIAFGDVVYRIGDKVLQLVNQPENHVYNGDMGEIISIFYAKENTEKQDMV
IVSFDGVEATYTKQDLNQITHAYCCSVHKSQGSEFPIVIVPVVKSYYRMLRRNLLYTAIT
RSKQFLILCGDEEALKMGIQRLDDQSRRSNLRLKLQDEIFEGETIEAVDESLTYEDYLMK
VDPLIGMENITPYDFLEAD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagaattcattagatttatttgctgaacaaaaaacgtatgtaaagggcaag
catcttgtgactattttccataatgagagtaatctttatacggttttacgtattcgggtg
ctagagacaaatgcacaatatgaagagaaagaagcggtcattactggctacataccgaaa
atccatgaagaggagacctatacatttttaggggaatggaaggaacatccaaagtttggg
ttgcaattccatgtagagcagtacaagaaagaaatgcctcaaacaaaagaaggtgtcgtt
aattatttatcaggtgacctctttaaaggaattggtaagaaaacggcacaaagtatcgtg
gacgagcttggagaaaatgcgatcaatagcattttaaataatccttcattattagatggg
ataccaaaattagcaagtgaaaaagcgaaagttttatacgacacacttgtggagaatcaa
ggaattgaacaagtcatgattcacctcaatcaacttggttttggtccacaactatctatg
aagatttttcaaacatataaagatcaagcaatagatattttgcaaaaaaaaccttatcaa
ctcgtagaggatattgaagggattggcttccatcgggcagatgagattggacaacaagtg
ggaatgtcaggtagtcatcctgaccgtattaaagcagcatgtttgtatgtgcttgatagt
gaaagtgcacaggcaggtcacgtatatgctgaagcagaagaattactccctgctgtcaaa
aaactattagaggaaaaagcgactgaggtaatcccttacgaggcgattagtgaagcaatc
ttaaagctcggagaagagagaaaagtgattgcagaaggacagcagttatatttaccttct
cttttcttttctgaaaagggaatcgttacaaatatcaaacgtatactcaatcaaacggaa
tttaatgaacagtttcctgaatcggaattcctccttgctttgggacaattagaagagcga
ctttcggtacagtatgcgccatctcaaaaagatgccattcaaaaagcgttaatgtcgcca
atgatgatcttaactggtggtccaggtacgggcaaaacaacggttattcaaggaattgtt
gaattgtatggtgaattacatggctgtagtttaaatccgaaagactataaaaaagaagag
ccttttcctttcttattagctgcacctactggaagagcttcgaaaagaatggcagaatct
acaggattaccagctgtgacgattcacagattgcttggttggaatggaagtgagggtttt
gaccatcatgaagaaaacccgcttgaagggaaaattcttattgttgatgaaacttccatg
gttgatatatggctagccaatcaactttttaaagcgatccctgaagaaatgcaagtcata
cttgttggtgatgaagatcaattaccatctgtgggcccaggtcaagtattaagagattta
ttactttctgaacgtatcccttcggttatgttgacagatatttataggcaatcggaaggc
tcgtcaattattgagttagcacatgaaatgaaaaagggaagattgccgcaaaatattact
cagcaacaaaaagaccgttccttttttcaatgccaaccaggtcaaattggcacggttatc
gggcaagtagtgcgaaatgcaaagaaaaaggggtatttagcaaaggatattcaagtactt
gcaccgatgtatcgtggtcctgcaggtattgatcgccttaataaaatgatccaagaaatt
ttcaaccctaatgaagatggtagtagaaaggaaattgcttttggtgatgttgtctatcgc
attggagacaaggtgttgcaattagtcaatcaacctgaaaaccacgtttataacggtgat
atgggtgaaattatttccatattttatgcaaaagagaacacagagaaacaagatatggtt
attgtttcttttgacggagtggaagcaacgtatacaaaacaggatttaaatcaaatcact
catgcctattgttgttccgttcataagtcacagggcagtgagtttccgattgttattgtt
ccggtcgttaaaagttattaccggatgttacggaggaatttattatatactgccattaca
cgaagcaagcagttccttatattatgcggtgatgaagaagcgttaaaaatgggtatacaa
cgattggatgatcaatcgaggcgatctaacttacgattgaagttacaagatgaaatcttc
gaaggagagaccattgaagctgtagatgaatcattaacatatgaagattatttgatgaaa
gtcgacccgttgataggaatggaaaatatcacaccttatgattttttagaggctgattag
DBGET
integrated database retrieval system
