Cytobacillus kochii: CKF48_17750
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Entry
CKF48_17750 CDS
T05194
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bko03019
]
CKF48_17750
03009 Ribosome biogenesis [BR:
bko03009
]
CKF48_17750
Enzymes [BR:
bko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CKF48_17750
Messenger RNA biogenesis [BR:
bko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CKF48_17750
Ribosome biogenesis [BR:
bko03009
]
Prokaryotic type
rRNA helicases
CKF48_17750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
Helicase_RecD
CP_ATPgrasp_2
Motif
Other DBs
NCBI-ProteinID:
ASV68978
UniProt:
A0A248TL76
LinkDB
All DBs
Position
3492461..3493765
Genome browser
AA seq
434 aa
AA seq
DB search
MNETRFERYEFKPFIIEAVKKLGFYEPTDIQERLIPTVLKGESAIGQSQTGTGKTHAYIL
PMVEKLQTNKKGVQAIITAPTRELANQIYQEVLKITSHSEDAIAVKLFIGGTDKQRTIEK
LKTQPQIVVGTPGRINDLVKEQALLIHTASLLVVDEADLMLDMGFLEDVDQIASHMQEKL
QMLVFSATIPEKLKPFLKKYMENPKYVHVEPKQPTAAKIEHQLLPSRHRNKVNLVFDALQ
SFNPYLAIVFTNTKKKADEVADGLMAKGLKVGRIHGDLNPRERKKMMKQIVDLEFQYIVA
TDLAARGIDIKGISHVINYELPTDLDFYIHRVGRTARAGTSGIALTIYDPTDEDALNKLE
KMGVTFTHIDFVKGNWVKLDDRNKRKNRQRQTDEIDKKASSLVQKPKKVKPGYKRKRKWE
MEKIKKRERRIKRK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacaagatttgaaaggtatgagtttaaaccttttattatagaagcagtaaag
aagttagggttttatgaaccaacagatatacaggaaagattaataccgactgtcttaaaa
ggggaaagtgccattggtcaatcccagacaggtacaggtaaaacacacgcttatattctg
ccaatggttgaaaaacttcaaacaaataaaaaaggtgtacaagcaattatcactgcacca
actagagagctagccaaccaaatttatcaagaggttttaaaaatcacgagccatagtgaa
gatgctatcgcagttaagctctttatcggtggtacagataaacaaagaacaattgaaaag
cttaaaacgcaaccgcaaatagttgttggtacaccgggaagaattaatgatttagtgaaa
gagcaggcattgcttatccatactgcttcattattagttgtggatgaggcggacttaatg
ttggatatgggcttcttggaagatgttgaccaaatcgcttcacatatgcaagagaaattg
caaatgcttgtgttttcagctacgatcccagagaagcttaaaccatttttgaaaaaatat
atggaaaacccaaaatatgttcatgtagagccgaagcaaccaaccgcagctaaaattgaa
catcaattattaccttcaagacaccgcaacaaagtaaatcttgtgtttgatgctttacag
tcttttaacccgtatttagccatcgtgtttacgaatacgaagaaaaaggcagatgaagtc
gcggatggtttaatggctaaaggcttgaaagtcggaagaattcacggagatttgaaccca
cgagaacgaaagaaaatgatgaagcaaatcgttgatctcgaattccaatatatcgtagca
actgatttagctgctaggggtattgatattaaaggaattagtcacgtaattaactacgaa
ttacctacagacttagatttttatattcatcgtgtaggtagaacagcgagagcaggcact
tcaggtattgccttaacgatttatgatccaacagatgaagacgcattaaataaattagag
aagatgggcgttacttttactcatattgattttgttaaaggaaattgggtaaaacttgac
gatcgtaataaaagaaaaaacagacaacgtcaaacagatgagattgataaaaaagctagt
tcacttgtacaaaaaccaaaaaaagtaaaaccaggatacaaaagaaagcgcaaatgggaa
atggaaaagataaagaagagagaaagaaggattaaaagaaaataa
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