Cytobacillus kochii: CKF48_18885
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Entry
CKF48_18885 CDS
T05194
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bko
Cytobacillus kochii
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bko03032
]
CKF48_18885
03036 Chromosome and associated proteins [BR:
bko03036
]
CKF48_18885
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_18885
DNA replication proteins [BR:
bko03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CKF48_18885
Chromosome and associated proteins [BR:
bko03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CKF48_18885
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CKF48_18885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
Rpf1_C
Peptidase_A22B
Motif
Other DBs
NCBI-ProteinID:
ASV69188
UniProt:
A0A248TLT2
LinkDB
All DBs
Position
3703820..3704164
Genome browser
AA seq
114 aa
AA seq
DB search
MFTNECKESLFYWVYDIFWEEVKVMNKTELINAVAEASELSKKDATKAVDAVFDTVLDAL
KNGDKVQLIGFGNFEVRERAARKGRNPQTGEEIEIAASKVPAFKPGKALKDAVK
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttgtttacaaatgaatgtaaggaatctttattttactgggtttacgatattttttgggag
gaggtgaaagtaatgaacaaaactgaactaattaatgcagttgcagaagctagcgagctt
tctaagaaagatgctactaaagcagttgatgctgttttcgatacagtgcttgatgcactt
aaaaatggtgataaagtacaactaattggttttggtaactttgaagttcgtgaacgtgca
gcacgtaaaggccgcaacccacaaactggcgaagaaatcgaaatcgctgcaagcaaagtt
cctgctttcaaaccaggaaaagcgcttaaagatgcagtaaagtaa
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