Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0149
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Entry
BBKW_0149 CDS
T04223
Name
(GenBank) transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bks03000
]
BBKW_0149
Transcription factors [BR:
bks03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BBKW_0149
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_Tnp_1_2
HTH_23
Astro_VPg
HTH_31
HTH_7
DUF6262
Motif
Other DBs
NCBI-ProteinID:
BAQ28284
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Position
complement(202554..203150)
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AA seq
198 aa
AA seq
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MDGQHNASAMTVGDARRAQIVRAAREICLEKGFSKITISDIAGRVGMTRSLFYHYFQDKD
QVADAVLDDVIDEVITHLEEWNANREVGNISKALDDVVRLTRSLITDEGPFSQRMIEDGN
AGLYVKFIDRVADRIAEYICNSTVRDFEKLHGMPITNEHETFYTLIVGLISLIRLHPDIE
DTVIRQVAAQTLHLNEYM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacggacagcacaacgcttccgcgatgacagtcggagacgcacgccgtgcgcaaatc
gtgcgcgcagcacgcgaaatctgcctggaaaagggcttttcgaaaataacgatcagcgat
atcgcaggccgcgtaggcatgaccagatctctcttctaccactatttccaagacaaagac
caagtcgcggacgccgtactcgacgacgttatcgacgaagtcatcacacacctggaagag
tggaacgcgaatcgcgaagtcggcaatatttcgaaagcactcgacgacgtggtgcggctg
acccgctccctcatcaccgatgaaggaccgttcagccagcgcatgatcgaagacggcaat
gcgggactgtacgtcaaattcatcgaccgcgtggccgatcgcattgcggaatacatctgc
aattcgacagtgcgcgatttcgaaaaattgcatggcatgcccatcaccaacgagcacgag
acgttctacacgctcatcgttggactgatttcgctgatcagactgcacccagacattgaa
gacaccgtcatcagacaggtcgcagcgcagacgctgcacctgaacgaatacatgtaa
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