Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0150
Help
Entry
BBKW_0150 CDS
T04223
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03030
DNA replication
bks03430
Mismatch repair
bks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBKW_0150
03430 Mismatch repair
BBKW_0150
03440 Homologous recombination
BBKW_0150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bks03032
]
BBKW_0150
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_0150
Enzymes [BR:
bks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBKW_0150
DNA replication proteins [BR:
bks03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBKW_0150
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBKW_0150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_22
zf-CXXC
AAA_14
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAQ28285
LinkDB
All DBs
Position
203421..206000
Genome browser
AA seq
859 aa
AA seq
DB search
MALALYRRYRPDTFDGVIGQDQVTVPLMRALDENKLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTPQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
KEVMGPYLEQICEDEHIEAEPGVLRLAMRAGGGSVRDTLSVLDQLMVGAVDGSIAYDSAV
ALLGFTPDALISEAIDAVADKNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLG
GTRAESVLSDEAAAENMDDLHRQASALGLSALTQMADTINATLANMTGAISPRMRLELLA
ARLLAGREEGMAAVASSSGMPDFAGDSGASAAAESLRGSMAGSRRRTARYADGVRPQDSA
AAIDAPSEPVKPAVQPSAAPMNPADAVASGVASMLADVQQAMNATSSVAATAPAATSVPA
PAHDDRTPDQKWDALVAALPEDVRGYVNREKVPRVLLRGDSLWIKFDKALSKYAFAKGVA
KESVDGTTEVVKIVRAEVHKMFGPNVTLAPAKKLADGSESVPWSKLSPEEQSKINVQLAQ
ERLKSATLLTANLGTAASLESSGKEPAVEGAQKAEDGGNAGDSNDEEAHRAVADATAEND
PWAVSQQAAVVPSQLDDDPWAVPAQQVQSQSVIASGVNDVKAPEQHTKHVAVPDTSDNVD
PWAVPAPVPQQPSEDDDPWGAPMPVQAGPADPMPVPVEPETAPKHANHQHRVPRQEAASQ
QNQPNADPWSQQFSAPAQPTPQVAAEDDEYSMSDESIGASNALSVDDLTRLFEVKKVEDF
GPDDAKNPRNMQQKKNLDE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcactctatagaaggtatcgtcccgacacgttcgacggcgtgatcggtcag
gaccaggtcacggttccgctcatgcgcgcgctcgacgagaacaagctcacgcacgcatac
ctgttctccggcccgcgcggttgtggcaaaaccagttccgcccgcattcttgcgcgatgc
gtcaactgtgcgaaaggtccgacctcgcatccgtgcggcgaatgtgaaagctgcaaggat
ctcgccacgggcggccccggttccatcgatgtggtggaaatcgacgcggcctcgcataac
ggcgtggacgacgcccgtgagctgcgtgagcgcgctggtttcgcgccggcccgcgaccgc
tacaagatcttcattctcgacgaggcccatatggttacgccacaaggcttcaacgcgctg
ctgaaaatcgtggaggagccgccggagcatgtgatgttcatcttcgccaccaccgaacca
gacaaggtgatcggcaccatccgctcgcgcacccaccattacccgttccgcttggtgccg
aaggaggttatgggcccgtacctcgagcagatctgcgaagacgagcatatcgaggccgag
ccaggcgtgctgcgtcttgccatgcgtgccggcggcggttccgtgcgagacacgctttcc
gtgcttgaccagctcatggttggtgcggttgacggcagcatcgcatacgattccgcggtt
gctttgctcggtttcacgcctgacgctctgattagcgaggccatcgacgccgttgccgac
aaaaatggcgaagcactgtatggcgtgattcagaaggttgtggtcggcggtttcgatccc
cgtcgattcgttgaggatttgcttgcccgcgtgcgcgatttgctggtgctcacgttgggc
ggaacgcgcgcggaaagcgtgctttccgacgaggcggccgccgagaacatggatgatttg
catcgtcaggcttccgctttgggattgtctgcgttgacgcagatggctgacacgattaat
gcgacgcttgctaatatgaccggtgcgatttcgccgcgcatgcgactggaattgcttgcc
gctcgcttgctggccgggcgtgaggaagggatggctgccgttgcgtcatcttccggtatg
cctgattttgctggcgattccggggcttccgccgctgcagaatcgctgcgtggatctatg
gccggctcgcgccgccgtacagcgagatatgccgacggtgttcggccacaggattccgcg
gcggcaattgatgctccttccgagcctgtgaaaccggctgtgcagccgtctgcggctccg
atgaatcccgctgacgccgtcgcctccggtgtggcctccatgcttgcggatgttcagcag
gcgatgaatgcgacgtcttccgttgcagccactgcgcctgccgcaacttcagtgcctgct
ccggcacatgacgaccgtacccccgatcagaagtgggatgctttggtagccgcgcttcct
gaggatgtgcgcggttatgtgaatcgcgaaaaagtgcctcgtgtgctgttgcgaggcgac
agtttgtggatcaaattcgacaaggcgctcagcaaatatgcgttcgctaagggcgtggcg
aaggagtcggtggatggaaccaccgaagtggtgaaaatcgtccgcgccgaagtgcataag
atgtttggcccgaatgtcacgcttgcccccgccaaaaagctggcggacggttccgaatcg
gtgccgtggagcaagcttagcccggaagagcaaagcaagatcaacgtgcagctggcgcag
gagcgactcaaatccgcaacactgctgaccgcgaatcttggcactgccgcaagtcttgaa
tcttccggcaaagagccggcggttgagggcgcgcagaaagccgaggatggtggtaatgca
ggggattctaacgatgaggaggctcaccgagccgttgcggacgcaaccgctgaaaacgat
ccgtgggcggtctcacaacaggccgcagtagtcccatcgcaactggatgacgatccatgg
gctgtgccagcgcaacaggtgcaatcgcaatcggtaatcgcaagcggcgtcaacgacgtg
aaagcgccggaacaacacacgaaacatgtggctgttcccgatactagcgataatgtcgac
ccttgggccgtgccagcgccggtaccgcagcaaccgtcggaggacgacgatccttggggt
gcccccatgccagttcaggctggaccggcggaccccatgcccgtgccagtggagcctgaa
acggcccctaagcatgccaatcaccagcatcgcgtacctcggcaggaagcggcgtcgcag
caaaaccagccgaacgccgatccatggagccaacagttctccgctcctgcgcagccgaca
ccgcaggtcgccgcggaagatgacgaatattccatgagcgacgaatcgatcggagcgtcc
aacgcgttaagtgttgacgatctgacacgactattcgaagtgaaaaaagtcgaggatttc
ggccccgacgacgccaaaaacccgcgcaacatgcagcaaaagaagaatctcgacgagtaa
DBGET
integrated database retrieval system
