Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0166
Help
Entry
BBKW_0166 CDS
T04223
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03030
DNA replication
bks03430
Mismatch repair
bks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBKW_0166
03430 Mismatch repair
BBKW_0166
03440 Homologous recombination
BBKW_0166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bks03032
]
BBKW_0166
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_0166
Enzymes [BR:
bks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBKW_0166
DNA replication proteins [BR:
bks03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBKW_0166
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBKW_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
TniB
RuvB_N
AAA_22
NolB
Mg_chelatase
AAA_18
KTI12
Motif
Other DBs
NCBI-ProteinID:
BAQ28301
LinkDB
All DBs
Position
226193..227347
Genome browser
AA seq
384 aa
AA seq
DB search
MSVWDSIVGQQQVVEQLKAIASGDPKAIAQSWLICGPPGSGRSNVARAFAAALESPDHGL
GDEPTKAAQQVLAGTHPDVTVLATNKVTIGIDEVRNIITTSEQMPSTAPWRIIIIEDVDR
MLERTTNVLLKEIEEPSGHTIWLLCAPSAQDVLPTIRSRTRIVNLAVPSTQAVAAFLEQN
GGFEPKIAARAARLAEGHIGIARLYAENEQVMSDRDELIVGVLGLRRASDAVLLAGNLID
NAKAQAEAEVKVKAAEAEADFRRVNGLGAKDRIPPKLRGAYNAIAKKDELKRQTTRLTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSSITELSVRLTRGGAVRRLEDIAVA
RRRLAGNGNPILVFEALFCSLIAS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgtgggattcgatcgtcggccagcagcaggttgtcgaacaactcaaagccatc
gcaagtggcgatccgaaagccattgcgcaatcctggctgatttgcggccctcccggatcg
ggccgttccaatgtggcgcgcgcgttcgcggcggcgttggagagccccgatcatggtctt
ggcgacgagccgaccaaagccgcgcagcaggtgcttgccggcactcaccccgacgtgacc
gtgctggccaccaacaaagtgaccatcggcatcgacgaggtgcgaaacatcatcactacg
tccgagcagatgccaagcactgcgccgtggcgcatcatcattatcgaagatgtcgatcgc
atgctggaacgcaccaccaacgtgctgctcaaggagattgaggagccgagcgggcatacg
atttggctcttgtgtgcgccgagtgcgcaggacgtgttgccgacgattcgctcgcgcact
cgcatcgtcaatcttgccgtgccctccacgcaggcggtggctgcatttctggagcaaaat
ggcggattcgagccgaaaatcgcggcgcgtgccgcacgtcttgcggaagggcatatcggc
attgcgcgcttgtatgcggagaatgagcaggtgatgtctgaccgcgacgagctgattgtg
ggcgtgcttggattgcgtcgcgcgtcggatgcggtgctgcttgccggcaatcttatcgac
aatgcgaaggcgcaggccgaagcggaggtgaaggtcaaagcggcagaggcggaagctgat
tttcgcagagtcaatgggcttggggcgaaggatcgtattcctccgaagctgcgtggcgca
tacaatgcgattgccaaaaaagacgagctgaagcgtcagactacgcgacttacacgtgat
gtgctcgaccgtgcgttgaactcgattgccagtatttaccgtgatgtggctgtgctgcag
aacaatgccgaggattcggtggggctgatcaatttggagaatcgttcgtcgatcaccgaa
ctgtcggtgcggcttacgcgtgggggagcggtgcggcggctggaggatattgccgttgca
cgtcgccgcctggccggcaatggcaatcccatactggtcttcgaagccctcttctgctcc
ctcatcgccagctaa
DBGET
integrated database retrieval system
