Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0327
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Entry
BBKW_0327 CDS
T04223
Name
(GenBank) beta-1,4-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00520
Amino sugar and nucleotide sugar metabolism
bks01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BBKW_0327
Enzymes [BR:
bks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BBKW_0327
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
BAQ28462
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Position
413906..415537
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AA seq
543 aa
AA seq
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MQIANPVLPGFNADPSMIRVGDTYYIANSTFEWFPGVRLHESKDMVHWNLLPSPLSRISQ
LDMRGNPSSGGIWAPDLSYADGKFWLIYTDVKVVNGAFKDCTNYLVTAESIHGPWSEPIR
VNGVGFDASLFHDDDGRKYLVQQTWDFREYHHGFDGITLTEFDVKTMKLKPETERTIWRG
TDVKLTEGPHLYKINGYYYLFAAEGGTVYTHQEVVARSKTLDALSFEGMPSNPFITNFDT
PRSYLQKQGHGALVDTPSGEWYYASLCGRPWHHDNESFTDPRGWCTLGRETSIQKVEWTE
DGWPYIVGGHGGQRYVDAPKDAIETEAPADHSQHDDFMSDTLDLNWNTLRVPFDGKMGKV
GGGVLELRGQGSLCNLFDLSLVARRWQAFNFDATVKVEFDPKNYRQMAGLTNYYDDLCWS
WVFVTWDEQRQCRVIEVAQNDFNNYTSFLRDKAPVVPDDVKTVWLRTKVRKQWYSYEYSF
DGTSWVDLGVKLDAKILSDDYILRRYGGFFTGAFVGLAAIDLSGYDRVAKFSEFDYRELP
DNE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgcaaaccccgttctcccgggattcaatgccgatccctctatgattcgagtc
ggggatacctactacattgccaattccacgttcgaatggttcccaggtgtccgtctgcac
gagtccaaggacatggtccattggaacctgttgccgagtccactgagccgcataagccag
cttgatatgcgaggcaatccgtcatccggtggcatctgggctccggacctttcctatgcg
gacggcaaattctggctgatctacacggacgtgaaggtcgtgaacggtgcgttcaaggat
tgcacgaactatttggtcactgccgaaagtatccatggtccgtggagcgagccgattcgc
gtgaacggtgtcggcttcgacgcaagcctgttccatgacgacgatggccgcaagtatctg
gtgcagcagacttgggattttcgtgagtaccatcatggcttcgacggcatcacactgacc
gaattcgatgtgaagacgatgaagctcaagccggaaactgaacgtacgatttggcgcggt
acggacgtcaaactcaccgagggaccacatctgtacaagatcaatggctattactacctg
ttcgccgctgaaggcggtaccgtgtatacgcatcaggaagtcgtggcccgatccaagact
ttggacgcgttgtccttcgaaggcatgccgtcgaatccgttcatcacgaatttcgacacg
ccgcgttcctatctgcaaaagcaggggcatggcgcgctggtcgataccccgtccggcgaa
tggtattacgcctcgctgtgcggtcgtccgtggcatcacgacaatgaatccttcactgat
ccgcgcggctggtgcacgctggggcgtgaaacctccatccagaaggtcgaatggaccgag
gatggctggccgtatattgtcggaggccatggcggacagcgttatgtggatgctccgaag
gatgccatcgagaccgaggcacctgcggatcacagccagcatgacgatttcatgtccgat
acgttggatttgaattggaatacgctgcgtgtgccgttcgatggcaagatgggcaaggtc
ggtggcggcgtgttggaactgcgtggccagggctcgctgtgcaaccttttcgatctgtcg
ttggtggcacgtcgttggcaggcgttcaacttcgatgcgaccgtgaaagtcgaattcgat
ccgaagaattaccgtcaaatggccggtctgacgaattactatgacgatttgtgctggtcc
tgggtgttcgtgacctgggacgaacaacgtcagtgccgtgtgattgaagtcgcacagaac
gatttcaacaactacacgtctttcctgcgcgacaaggcacctgttgtgccggatgacgtg
aagaccgtatggctgcgcacgaaggtgcgtaagcagtggtattcgtacgaatattcgttt
gatgggacttcatgggtcgatttgggcgtgaaactggacgcgaagatcctgtcggacgac
tatatcctgcgtcgatacggcggattcttcaccggagcattcgtcggtttggctgcaatc
gatctttctggatacgacagggttgcgaaattcagcgaattcgattatcgggaattgccc
gataacgagtag
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