Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0385
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Entry
BBKW_0385 CDS
T04223
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bks03016
]
BBKW_0385
Enzymes [BR:
bks01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBKW_0385
Transfer RNA biogenesis [BR:
bks03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBKW_0385
Prokaryotic type
BBKW_0385
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAQ28520
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Position
465855..466919
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AA seq
354 aa
AA seq
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MTKKPEHSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHNKTYEATIRLGQRTTTDDAEGELLPGEWAASFPSRQAVEQLIAERFTGRIEQ
VPNVYSAIKVNGQRAYDLAREGKDVELKARPVTIEEFNVRQVRYGYTHSDRAGVELVGAV
VAEKASDGWIANIAPHEDMQPVMELDVTVTCSAGTYIRALARDLGEELGLGGHLTMLRRT
RVGRFSVNMPNVMSAHAESKTFTNREGMEVTRNRAVLDDADHALDHALDPVASAAASMSM
LAVSEQEAADLRFGRRIAHDVRTTTAAYVEETNDLVAILERAKRGEAKPVAVFN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagcctgaacattccggtctgctggtcatcgacaagccgcagggcgtcacc
agccatgacgtggtcgcggccgtacgcggcgccctgcatatgaaacgagtcgggcatgcg
ggcacgctcgatccgatggccaccggcgtgctggtggtcggattcggcaatgccacgcga
ctgctcaactacattgtcgaccataacaaaacgtacgaggccaccattcgccttgggcag
cgcactaccacggacgatgccgaaggcgagttgctgccgggggagtgggcagcgagcttt
ccctcacgtcaagctgtggaacagctgatcgcagaacggtttaccgggcgcatcgaacag
gtaccgaacgtctactccgccattaaggtcaacggtcagcgcgcctatgatctagcgcgc
gaaggtaaggatgtggaacttaaggcacgtcctgtgaccatcgaagagttcaacgtacgg
caggtgcgttacggctacacgcatagcgatcgtgccggcgtggaacttgttggcgcagtc
gtggccgagaaggcaagcgatggatggattgccaacattgcaccgcatgaagacatgcag
cccgttatggaactcgacgtgaccgtgacttgttccgcaggcacctacattcgcgcgctc
gcacgcgatctgggcgaggaactcgggttgggaggccacctgacgatgttgcggcgcacg
cgcgtcggcagattctcagtgaatatgcccaacgtcatgagcgcccacgctgaatccaaa
acattcaccaatcgtgaaggcatggaagtgacgcgcaatcgtgcggtgcttgacgatgcc
gatcatgcgctcgatcatgcgctcgatcccgtggccagcgccgcggcttccatgagtatg
ctggccgttagcgagcaagaggcggccgacttgcgtttcggacgcagaatcgcgcatgac
gtacgtacgaccacggcggcgtacgttgaggaaaccaacgatttggtcgctatcctcgaa
cgtgcgaaacgcggtgaggccaaaccggtcgcggtattcaactga
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