Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0456
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Entry
BBKW_0456 CDS
T04223
Name
(GenBank) glycosyl hydrolase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00520
Amino sugar and nucleotide sugar metabolism
bks01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BBKW_0456
Enzymes [BR:
bks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BBKW_0456
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Gene cluster
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
BAQ28591
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Position
554794..556320
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AA seq
508 aa
AA seq
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MSNVVDADLARRLLIPFVDDSGGVYAPTLRRIHGKYVIACTIARLDDRRAMEGGCTESEL
MRFHAAEGNFILEADSIEGPWHGPFWIEGAEGIDPDIFEDGDGNVYWTQTRPAVNPQWEG
QTEVWTQRINPETWTFVDDGLPAGSGKTVIWRGYGMESVWAEAPHLYRVGDYVYLMTAEG
GTSFEHSEMAMRIYAPHGLLRAFEAYERDVSELGECIPQVRDGERCYLGTAIRAFHADKK
NPILTHRHLGLSEPLQCVGHADLLLHPELGWWLVCLGVRETRGKRDGELLSYLGRESFVA
PVSWEHNPADWKLDGNGASYTHEGDPGWPVTCAGLGRLADEITVTTEDDGISIEPRVKSS
LAGDVEPALVDVTDGSTNDVVVRDERDVSYRRIAKLPTLMPIPMSGSLVIRQNSTHYAVF
SMHGTDVRYEMVNGDDSQAGSVAVQADGVRPAVLFGDNRLSVIVTGTHGLVDSATFVRQG
QVLLSVDARFLSTEWAGGFVGCMAGFMA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatgtggtagatgctgacttggcaaggcgcctgcttattcctttcgtggatgat
tcgggcggtgtctatgcgccgacgctgcgcaggattcatggcaaatatgtgattgcatgc
accattgcccgtcttgatgatcgccgtgctatggaaggtggttgcacagaaagcgagctg
atgcggttccacgccgcggagggcaattttatccttgaagcggattctatcgaagggcca
tggcatggcccgttctggattgagggcgctgaaggcatcgatccagacatattcgaggac
ggggatggcaacgtgtactggacccagacccgtcctgcggtcaatccgcaatgggaaggc
cagaccgaggtctggacccaacgcattaatccggagacttggacttttgtcgatgacggt
cttcctgcgggatcgggcaagacggtaatatggcgcggatacggtatggaatcggtgtgg
gctgaggcgccgcatctctatcgcgtgggtgattatgtgtatctgatgaccgctgagggg
ggcaccagtttcgaacatagcgaaatggccatgcgcatctatgcgccgcatggactgctt
cgggcgttcgaagcttacgaacgggacgtatccgaattgggtgagtgcattccgcaggtt
cgtgacggggaacgctgctatcttggcaccgcaatccgtgccttccacgcggataagaag
aatccgattctcacccaccgacatctgggtttgtcggaaccgctgcaatgcgtgggacat
gcggacctgttgcttcatccggaactgggatggtggctggtgtgtctcggcgtgagagag
acacggggaaagcgtgacggcgaattattgagctacttgggaagggagagctttgtcgct
ccggtatcctgggaacataatccggccgattggaagctggacggcaacggtgcatcatat
acgcatgagggtgaccccggatggccagtgacttgcgctggtcttggccgcttggccgac
gagatcacggttactactgaagacgatggcatctccatcgagcctagggtgaaatcctcg
ctcgccggtgacgtggaacctgcgctggtggatgtgactgatggctcgacgaacgatgtg
gtggtgcgcgatgagcgtgatgtcagctaccgcagaatagcgaaactgccgacgctcatg
ccgattcctatgtccggttctttagtgatccggcagaattccacacattacgcggtgttc
tcgatgcatggcacggatgtgcgttacgagatggtgaatggagacgattcgcaagctggg
tctgttgccgtacaggctgacggagtgcgtccggcggtacttttcggcgacaaccgcttg
tcggtcatcgtgactggcacgcatggtctggttgattctgcgacgttcgtgcgtcagggg
caggtcctgctgagtgtcgatgctcgtttcctcagcaccgaatgggccggtgggttcgtc
ggttgcatggccggcttcatggcatag
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