Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0483
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Entry
BBKW_0483 CDS
T04223
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bks03032
]
BBKW_0483
03029 Mitochondrial biogenesis [BR:
bks03029
]
BBKW_0483
Enzymes [BR:
bks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBKW_0483
DNA replication proteins [BR:
bks03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BBKW_0483
Mitochondrial biogenesis [BR:
bks03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BBKW_0483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
Viral_helicase1
AAA_16
nSTAND3
NTPase_1
DEAD
AAA_24
SH3_13
AAA
AAA_5
AAA_14
TrwB_AAD_bind
AAA_11
Herpes_Helicase
SLFN-g3_helicase
UvrD_C_2
cobW
Zeta_toxin
TsaE
MeaB
Helicase_RecD
AAA_18
ABC_tran
IstB_IS21
KdpD
AAA_7
YqeC
DnaB_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAQ28618
LinkDB
All DBs
Position
582499..583905
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AA seq
468 aa
AA seq
DB search
MRQAEALAILQSGTSVFLTGAPGAGKTYVLNEFVRQARAEGAAVSVTASTGIAATHINGQ
TIHSWSGVGLANALTDNLIKTIRTRRKRKLQGADILIIDEVSMLHAWLFDMVDQVCRIIR
RDQRPFGGLQVVLSGDFFQLPPVSMGGRNHDLVTPSPEFVASRERYAKAGLNPDGFVTES
LVWRELNPAICYLTEQHRQDDGSLLTVLTDIRNGCVNDDDRNVLLTRLGAIPEPGQQAVN
LFPVNKQADTLNDMRLFEISEEPHEYFAEAAGPVNLVERLKKNMLAPERLQLKTGAAVMA
VRNDTDHQFVNGSLGTVRGFAAENKGGWPIVEFENGNVVTMKPNCWEMMDGDTVLASVNQ
VPLRCAWAITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVEGLQGLYLNGVNERMFLV
SPDAVRLDGELRLASAQASDMLAHDGIAAFRQMTAASDDDEFAQDALF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaggctgaggcattggcgattctgcaaagtggtacgagcgtctttctgacaggc
gcgccgggcgccggcaagacttacgtgcttaacgagttcgtacgtcaggcccgtgccgaa
ggtgcggcggtgtcggtgacggcgtccaccggtattgcggccacgcacatcaacgggcag
accattcattcatggagcggtgtcggacttgccaacgcgctcaccgacaatctgatcaaa
accatacgtacccgacgcaaacgtaagctgcaaggcgctgacattctcatcatcgacgag
gtttccatgctgcatgcgtggctgttcgacatggtcgatcaggtgtgccgcatcattcgc
cgtgaccagcgcccgttcggcgggcttcaagtggtgctgtccggcgatttcttccagctt
ccgccggtgagcatgggtggacgcaaccacgatctggtcacaccaagcccggaattcgtg
gcttcccgcgaacgatatgcgaaagcgggacttaatccagatggtttcgttaccgaatca
ttggtatggcgggaattgaatcctgcgatctgttacctgaccgaacagcatcgtcaggat
gacggcagtctgctcaccgtgttgaccgatattcgcaacggttgcgtgaacgacgatgac
cgcaatgtactcctcaccaggctgggcgcaattcccgaacctggtcagcaggccgtcaat
ctgtttcccgtcaacaagcaggcggacacgctcaacgacatgcgcctgttcgaaatcagt
gaggaaccgcacgaatatttcgccgaagccgcagggccggtcaatctggtggaacgtttg
aagaaaaacatgcttgcccccgaacgtttgcagctcaaaaccggagctgcggtgatggcc
gtacgcaacgacaccgaccaccaattcgtgaacggatcattgggcaccgtgcgcggattt
gccgccgaaaacaagggcggatggccgatcgttgaatttgaaaacggcaatgtcgttacc
atgaagccgaattgctgggaaatgatggacggcgacacagtgctcgccagcgtcaaccag
gtgccgttgcgctgtgcgtgggcgatcaccatccacaaatcgcaaggtatgacgctcgac
cgtgcggtgatggatttgcggcgcaccttcgcgcccggcatggggtatgtggcgctgtct
cgtgtggaaggtctgcaaggcctgtatctgaacggtgtgaacgaacgcatgtttttggtt
tcgcccgatgcggtgcgattggatggtgagttgcgtctcgcctcggcgcaggcatccgat
atgttggctcatgatggcatcgccgcgttccggcagatgactgcagcctcagacgatgac
gagttcgcgcaggatgcgctgttctag
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