Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0607
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Entry
BBKW_0607 CDS
T04223
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBKW_0607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_0607
Enzymes [BR:
bks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBKW_0607
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBKW_0607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Cir_N
Motif
Other DBs
NCBI-ProteinID:
BAQ28742
LinkDB
All DBs
Position
719437..721668
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AA seq
743 aa
AA seq
DB search
MSTEDAEQLALDGLAPRKRRKRAPTPKTPAAEHPIAQVVLDIQATHLGQTFDYYVEEKYS
EDAQPGVMVRVRFGGQRVNGIVWNRTDTSETPESSLRFIERVVSDRVLVPASMRNDVTLI
ADAFGGTRANILRLAVPARVARVEQEQRTGNRTNIEKNRRRESLAKAERESYEQLQRQYG
NINLLHEALESQRFQSFVFDPLPGADHWRQCAAWMVVLALLQGKPAVLVLPTMREIEDMA
ETLQAIGLHPFTPTQSSNGAYDGDFAILNAQMAPAERYRAYLAISEGQARCVIGTRAAMY
APVNDNALFFILDDVCYQDADGMMPYANARGVLRLRAKSHNGVFVAMANARSVQSQWETD
AAHVGATQVSGFSTPIHAFPAVTKEASPWIRWLNRDELTRLADATIGARVPHTAVRVLSK
ALESGPVLLSIPQDGISEALSCAKCHRQARCSYCTGPLERLLDGSVRCRWCGSATVRWAC
PACRGERMRVVRVGAAGTAQELSRLFRGVPIVLSTPSQPRGIVSDIGFTPQLVIATPGGE
PRVRGRNPSECEYRAVAILDAWTSLYAFGIDAGIDTLTSWMRAVSLCAPRIRGGQALLIG
ETDPTLAQSLMLWNSTLLAQTELQEREQTALPPVFAAACVWGRRDAVKATLERIGALGGG
DMSTIETAEGVLPSVLGPVPIPQPRTIDSRELEGTADRVKAVVRVPQSRRGELALRLRSA
SARHVAAREPGELRFQLDPKERI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaggatgccgaacagctggcgcttgacgggcttgccccgcgcaaacggcgc
aaacgtgcgcctacgcccaaaacgccggctgccgagcatcccatcgcccaagtggtgctg
gacattcaagccacccatttggggcaaaccttcgactattacgtcgaggagaaatattcc
gaagacgcacaacccggcgtaatggtgcgcgtgcgcttcggggggcaacgggtcaacggc
atcgtatggaacagaaccgacaccagcgaaaccccggaatcgtcgctgagattcattgaa
cgagtggtctcagatcgtgtgctggtgcccgcatccatgcggaatgacgttacgcttatc
gcggatgcgttcggtggaacacgagccaacatcctacgtttggcggtgcctgcgcgcgtg
gcgcgagttgaacaggagcagcgcaccggcaatcgaacgaatatcgaaaaaaacaggcgc
agggaatcgcttgccaaggccgaacgggaatcatacgaacaactacaacggcaatacggc
aatatcaatctgcttcacgaagcgttggaatcgcaacgtttccaatcattcgtattcgat
ccgcttccgggtgccgatcattggcggcagtgcgcggcgtggatggtggttttggcgctg
ctgcagggcaaaccggcggtgctggtgctaccgaccatgcgtgagatagaggatatggct
gagaccttgcaggctattggcttgcacccttttacaccgacgcaatcctccaatggagca
tatgacggcgatttcgccattctgaacgcgcagatggcgccggcggaacggtatcgtgcc
tatctggccatcagcgaagggcaggctcgatgcgtgatcggcacgcgtgcggcgatgtat
gctccggtgaacgacaatgcgttgttcttcatactcgacgacgtgtgctatcaggatgcc
gatggcatgatgccatacgccaacgctcgtggagtgttgcggttacgtgcgaaatcgcat
aacggcgtgttcgttgcgatggccaatgcgcgcagcgtgcaaagccagtgggagaccgat
gcggcgcacgtcggagccactcaagtcagcggtttcagcacgcctattcatgcatttcct
gcggtgaccaaggaggcaagtccttggattcgttggctcaaccgcgatgaactgacgaga
cttgcggatgcaaccattggagcgcgcgtgccgcacaccgcggtgcgagtgttgtcgaaa
gcgttggaaagtggcccggtgttgttgagcattccgcaagacggcatcagtgaggcgttg
agctgtgcgaaatgccaccgccaggcgagatgttcgtattgcaccgggcctttggaacga
ttgttggacggatccgtgcgatgccgctggtgtggctccgccacagtgcgatgggcgtgc
cctgcatgccggggcgagcgtatgcgagtggttcgtgtcggggccgcgggaaccgcacag
gaactgagccggctgtttcgtggcgttcccatcgtgctttcaacaccaagccaaccgcgt
ggcattgtttccgatattggatttacgccacagctggttatagccactcccggtggcgaa
ccccgtgtgcgtgggcggaatccttcggagtgcgaataccgtgccgtggccattcttgac
gcatggaccagcctgtacgcgttcggtatcgacgcgggcatagacacgttaacatcgtgg
atgcgtgcggtttcgctatgcgcgccgcgaatcaggggaggccaagcgctgctgatcgga
gaaaccgatcctacgcttgcccaatcgttgatgctttggaattcaacgctgttggcgcaa
accgaactacaggaacgtgagcagacggcattgcccccagtgttcgccgccgcctgcgtg
tggggtcgccgtgacgcggtgaaagccacgttggaacggattggtgcattgggaggggga
gatatgtctaccatcgaaaccgccgaaggcgtgctgccgtccgtactgggaccggtaccc
attccacagccgcgaaccattgattcgcgtgagttggaaggcactgcggatcgtgtcaag
gccgtggtgcgtgtgccgcaaagccgacgtggcgaattggcgttgcgtttgcgttccgcc
agcgcccgccatgtggccgctcgtgagcccggcgagctgcgtttccagcttgatccgaag
gagcgaatctga
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