Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0639
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Entry
BBKW_0639 CDS
T04223
Name
(GenBank) Clp protease
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bks03110
]
BBKW_0639
Chaperones and folding catalysts [BR:
bks03110
]
Heat shock proteins
HSP100
BBKW_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
UVR
AAA_14
TniB
nSTAND3
bpMoxR
RuvB_N
NACHT
AAA_3
AAA_24
AAA_7
AAA_18
IstB_IS21
TIP49
AAA_19
DNA_pol3_delta2
T2SSE
Torsin
NBD_SMAX1
tRNA-synt_1b
LUC7
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
BAQ28774
LinkDB
All DBs
Position
753858..756443
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AA seq
861 aa
AA seq
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MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKALASKGVTLDDTR
KQVEEMIGKGNATPNGHIPFTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVG
TQVLIKMDVNLGELRSATIDLIRGNSGDGKGDGKGDLANAGGVQDRRNQTGSAILDQFGR
NLTAEAAAGKLDPVIGRSSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG
DVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAG
SADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPSIAETI
EILKGLRSRYENHHHVTITDGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLT
APPELKELDTKIAKLAEEKDQSIKDQDFEKAAELRDKQEKLEAERKQKESSWREGESDVK
MVVDEDVIAEVISQTTGIPVFKLTQAESKKLMTMESELHKRIIGQDEAVSALSRSIRRAR
VGLKDPKRPSGSFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFG
APPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRRVD
FKNTIIILTTNLGTRDIAKAANTGFNLGANTESSYQRMKDQVSAELKQQFRPEFLNRLDD
IIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRR
VIQRDVEDAISEKILMGELEDGQRVKVDAEGEGILGEFTFTGEAFEEPNTEPADTESAET
EAAPAEAEVPAESMESAESTE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacggtttaccgaccgtgcgcggcgcgtgatcgtgctggcgcaggaagaagct
cgtaccctccagcacaactacatcggtaccgagcatctgctgcttggcctgattcgcgag
ggtgacggcgttgcagccaaggcgctggcctcaaagggtgtgaccttggatgacacccgc
aaacaggtcgaagagatgatcggtaaggggaatgccacgccgaacggccacattcccttc
accccgcatgccaggcaggtgttggagctgtcgctgcgtgaggcgttgcagctggggcac
agctatatcggcaccgagcatatcctgctcggtctgattcatgaaggcgaaggcgtaggc
actcaagtgctgatcaagatggatgtcaatcttggtgaactgcgcagcgccactatcgac
ttgattcgtggcaattccggtgatggcaagggtgatggcaagggcgatttggccaacgcc
ggtggcgtacaggatcgtcgcaaccagaccggttccgcgattcttgaccagtttggccgc
aatttgaccgccgaagctgccgccggcaagcttgatccggtgattggtcgctcgagtgag
atcgagcgtgtgatggtggtgctgagccgccgcaccaagaacaatccggtgctgatcggc
gagccgggtgtcggcaaaaccgccgtggtcgaaggtttggcgcagaagatcaacgccggt
gacgttccggagaccctgaagggcaagcaggtctattcgttggatctgggatccatggtg
gctggttcgcgctatcgtggcgatttcgaggaacgcctgaagaaggtgctcaaggagatc
aagacccgcggcgacatcgtgctgttcattgatgagatccacaccattgtgggcgctggc
tccgcagacggtgctcttggcgcttccgacatgctgaagcctatgctggcccgtggcgag
ctgcagaccatcggcgccactactaccgacgagtaccgtaagtacatcgagaaggatgcg
gctctggaacgtcgtttccagccgatccaggtgcatgagccgagcattgccgaaaccatc
gagatccttaagggcttgcgttcccgttacgagaaccaccaccatgtgacgatcaccgat
ggtgcgttgcaggccgcggccgaactgtcgagccgttacattcaggaccgtcacctgcct
gacaaggccatcgatctgatcgatgaggctggcgcgcgcttgcgcatccgtcgactgacc
gctccgccggaactcaaggaactcgacacgaagattgccaagcttgccgaggagaaggac
cagtccatcaaagaccaggacttcgaaaaggcagctgagctgcgtgataagcaggagaag
ctggaagccgaacgcaagcagaaggaatcttcatggcgtgaaggcgaatccgacgtgaag
atggtcgtggatgaggatgtcatcgccgaagtgatttcccagaccaccggcattccggtg
ttcaagctcactcaggccgagtccaagaagctcatgaccatggaaagcgagctgcataag
cgcatcatcggccaggatgaggccgtgtccgcattgagtcgctccatccgccgcgcacgt
gtcggcttgaaggatccgaagcgtccgtccggttcgtttatcttcgctggccccaccggt
gttggtaagaccgagctggccaagacgctcgccgaattcctgtttgacgacgaggacgcg
ctgattcgtgtcgatatgtccgaattctccgagaaatatgcggcttcacgcctgtttggt
gctcctccgggatacgtcggctatgaagagggcggcgaactcaccgagaaagtgcgtcgc
aagccgttctccgtggtgctgttcgatgagatcgaaaaggcccatccggatatcttcaac
acgctgctgcaggtgttggatgatggtcatctgaccgatggccagggccgcagggtggac
ttcaagaacaccatcatcattctgaccaccaatcttggtactcgtgacatcgccaaggcc
gccaacaccggcttcaacttgggtgccaacaccgagtcgagctaccagcgcatgaaggat
caggtctctgcggagctgaagcagcagttccgtccggaattcctgaaccgtctggacgac
atcatcgtgttcaagcagctcactgagccgcaggtgcgtcagatcgtcgatcttgacgtc
aagcagctcaatgatcgcttgttcgatcgccacatgtcgctcgagcttactgacgctgcc
aaggatctgctcgcgcagaagggcttcgacccgctgctgggcgcgcgtccgttacgtcgt
gtgattcagcgtgacgtcgaagacgccatttcggagaagattctgatgggcgaacttgaa
gatggccagcgcgtgaaggtcgatgcggaaggtgaaggcattctgggtgagttcaccttc
accggtgaggcgttcgaagagccgaacacggagcctgccgataccgagtctgctgaaact
gaagctgcaccggctgaagctgaggtgcctgccgaatcgatggaatccgcagaatccacc
gaataa
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