Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0711
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Entry
BBKW_0711 CDS
T04223
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
InvE_AD
Motif
Other DBs
NCBI-ProteinID:
BAQ28846
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Position
842025..844097
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AA seq
690 aa
AA seq
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MPDTVFDEDTLAAASKAMGEEEERPLTFAELGVPGPLVRVLAADDKKTAFPIQADTLPDS
LAGRDILGRGRTGSGKTLAFSIPLVARLGEVDANEYENMSQFRHEVDRVKQAHAKERRAD
NFVPHPRGLVLAPTRELANQINDVLMPLAQIYGINTTTVYGGVRYARQIRDLQAGADIVV
ACPGRLEDLIEQGALTLDKVEVAVIDEADEMADMGFLPPVKRLLGQISFDAQIMLFSATL
DHGVDEVVETFLSDPKVHSVDSATATVDEMTHHVFKTTQGNRHELVRTLASGKGRRILFT
RTKFQTQKLAKDLTQNGIPAAELHGNLSQNQRDRNLAAFNSGDVNVMVATDVAARGIDVS
GVELVVQVEPPEDPKSFLHRSGRTARAGHSGDVVTIILPNQRRRTRRMMREAGLTVEPID
VTPDSPEVLELVGEVAEPVFGWTLEQSQPAGNPRRRKNGKGGADGERSGRSNRSGGRNKD
RGKDKGGKPFKSERKDRRDRDQREERNDSAKKFEPKKNRAERRAAKFEGRDNREFEAREQ
RWEHPEIQEERREQHEEKRNNKRREKYARLHEQQRSDNEQRETTNRRRNDGDYGNTDNRR
KLGKKKSGQLAKKQGAPSKKQRKSEARAERQYDDNRRFKGKKHDERSSDVKRYDRHTEVK
RGGRGERHDKHAGQSRHRHANIRKAPFRTR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgataccgtttttgatgaagataccctcgcagccgcttccaaagcgatgggcgag
gaagaggaacgcccgctgacgttcgccgagctcggcgttcctggcccgctggtccgcgtg
cttgcggccgatgacaagaaaaccgctttcccgattcaggccgacacgcttcccgattcg
ttggctgggcgagacattctcggccgcggtcgtaccggctccggtaagacgttggcgttc
tcgattccgctggtcgctcgcttgggtgaagtggatgccaacgaatatgagaacatgagc
cagttccgccatgaggttgatcgtgtgaagcaggctcatgccaaggagcgtcgtgccgac
aatttcgtgcctcatccgcgtggcttggtgcttgctccgacacgtgagcttgccaaccag
atcaacgacgtgctgatgccacttgcccagatatacggcatcaacaccaccaccgtgtac
ggcggcgtacgttatgcccgccagatccgtgaccttcaggccggtgccgatattgtggtg
gcctgcccaggtcgtcttgaggatttgatcgaacagggcgcgctcaccttggacaaggtt
gaggtcgcggttatcgatgaggccgacgaaatggccgatatgggcttccttccgccagtc
aagcgactgctcggccagatttcgttcgacgcgcagatcatgctgttctccgccacgctc
gaccatggcgtggacgaagtggtggaaaccttcctgtccgatccgaaggtgcatagcgtc
gattccgcgacggcgaccgttgacgagatgacccaccatgtgttcaaaaccacgcagggc
aaccgtcacgagctggtgcgcaccctcgcttccggcaagggccgtcgcattctgttcacc
cgtaccaaattccagactcagaagcttgccaaggatttaacgcagaacggcattcctgcg
gccgaattgcacggcaatctgagtcagaaccagcgtgaccgcaatctggccgccttcaac
tccggcgatgtgaacgttatggtggccaccgatgtggccgcgcgaggcatcgacgtttcc
ggtgtggaactcgtggtgcaggtcgaaccgccggaagatccgaaatccttcctgcatcgt
tccggacgaaccgcgcgagccggtcattccggtgacgtggtgaccatcattctgccgaac
cagcgccgcaggacccgtcgcatgatgcgtgaggccggactgacggtcgaaccgatcgat
gtgacccctgattcgccggaagtgttggaactcgtaggcgaagtggccgagccggtgttc
ggctggacgcttgaacagtcgcagccggcgggaaatccgcgccgcaggaagaatggcaag
gggggtgccgacggcgaacgttccggcaggtcgaaccgttccggcgggcgtaacaaggat
cgcggcaaagacaagggcggcaagccgtttaagtccgaacgtaaggatcgtcgtgatcgc
gaccagcgtgaggagcgtaacgatagcgcgaagaagttcgaaccgaagaagaaccgtgcg
gaacgtcgtgccgccaagttcgaaggtcgtgacaatcgtgaattcgaagcgcgtgaacag
cgttgggaacatcctgaaattcaggaggaacgccgcgaacagcacgaggaaaagcgcaac
aacaagcgtcgtgaaaagtacgcgcgcctgcatgagcagcagcgcagcgacaacgaacag
cgcgaaacaacgaataggcgtaggaacgacggcgattacggcaataccgacaatcgcagg
aagctgggaaagaagaagtccggacagcttgcgaaaaaacagggtgcgccaagcaagaag
cagcgcaagtctgaagcccgtgccgaacgtcaatatgacgataatcgtcggttcaaaggc
aagaagcatgacgagcgttcctcggatgtgaaacgctatgaccgtcatacggaggtcaag
cgtggtggccgtggtgaacgtcacgacaagcatgcagggcagtcacgccatcgccatgcg
aacatcaggaaagcgccattccgcacgcgttga
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