Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0898
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Entry
BBKW_0898 CDS
T04223
Name
(GenBank) thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00730
Thiamine metabolism
bks01100
Metabolic pathways
bks01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BBKW_0898
Enzymes [BR:
bks01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BBKW_0898
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
TMP-TENI
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAQ29033
LinkDB
All DBs
Position
complement(1075091..1077730)
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AA seq
879 aa
AA seq
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MNNYPYASMRDSFDLSAYLVVGPQDCKGRPITDVVDDALRGGASFIQLRAKDADAKDLTD
MARDIAQIIEDNNKSDSVAFVIDDRVDVVWQARSKGIKVDGVHIGQTDMEPREARALLGE
DAIVGLSAETESLVKLINELPDGCIDYIGAAPLHVSVTKPEASVGGNDGSGRTLDEEQIN
TICSASGFPVVVGGGVTADDMEMLAHSKAAGWFVVSAIAGADDPEATTRDMVTRWKAVRG
DTKHGYAPRMKAQNTAEISPDNTADGASGEKKFTNAKEAKAASKLAKQQRVDIAARDSKQ
RDKAHIRKTTPVHFENEFGSYDLQVPYTEIKLSDTPGVGPNAPFKDYNTEGPKCDPKEGL
APLRLDWILDRGDVEEYEGRRRNLEDDGKRAIKRGKASKEWRGRQHKPMKAKDHPVTQMW
YARHNIITPEMRYVAEREHCSVELVRSELAAGRAVMPCNINHPEAEPMIIGSKFLTKLNA
NMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPMYQ
ALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRFVPLTANRMTGIVSRGGSI
MAEWCLQHHQESFLYTHFDELCEIFAKYDVAFSLGDGLRPGSLADANDAAQFAELMTLGE
LTQRAWEHDVQVMIEGPGHIPFDTVRMNIEMEKAICKDAPFYTLGPLTTDTAPGYDHITS
AIGGVEIARYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPHAIDRDN
AMSKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMAISQNIR
KKFGNAEAQEKLVADAQTIAAGMQAMSERFREQGGHLYQ
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattatccatatgcgtcgatgcgagacagcttcgacctgagtgcctatcttgtg
gtaggaccacaggattgcaaaggccgaccgatcaccgacgttgtcgatgatgcgttgcgc
gggggcgcaagcttcatccaacttcgcgccaaagacgctgatgcgaaagatcttaccgac
atggcgcgtgatatcgcgcaaatcatcgaagacaacaataagtcggattccgtggcattc
gtgattgacgaccgtgtggacgtggtctggcaggcccgcagcaaaggcatcaaggtcgac
ggcgtgcacatcggacagaccgatatggaaccacgcgaagcccgtgcactgcttggcgaa
gatgccatcgtgggattgtcggcggaaacggaaagcctggtcaaactcatcaacgaattg
cccgacggctgcatcgactatatcggtgcggcaccgttgcatgtttccgtcaccaagccg
gaagcgtccgtaggcggcaatgacggttccggtcgcacgcttgacgaagagcagatcaac
accatttgttcagccagtggttttccggtagtggtaggcggtggcgtgaccgcagatgat
atggagatgctggcacattcaaaggcggcaggctggttcgtggtgtccgcgattgcagga
gccgatgatccggaagccacaacccgcgatatggtaacgcgttggaaagccgtacgtggc
gacacgaagcacggatacgcaccgcgcatgaaagcccagaacacagcggaaatcagccct
gacaacacagccgacggcgcatccggcgaaaagaagttcaccaatgcgaaggaagccaag
gccgcatccaagctcgccaagcaacagcgcgtcgacattgccgcacgcgattccaagcag
cgagacaaagcacatattcgtaaaaccacgccggtacatttcgaaaacgaattcggttcc
tacgatctgcaagtgccgtacaccgaaatcaaactgtctgacactcctggcgtcggaccg
aacgcaccattcaaggattacaacaccgaaggcccgaaatgcgatccgaaggaaggtctc
gctcccctacgtttggactggattcttgaccgtggagacgtcgaggaatatgaaggacgt
cgccgtaatttggaagatgacggcaaacgcgccatcaaacgtggcaaggcttccaaggaa
tggcgtggccgccagcataagccgatgaaggccaaggatcatccggtgacgcaaatgtgg
tacgcgcgtcacaacatcatcacgccggaaatgcgctatgtggcggaacgcgaacattgc
agcgtggaattggtgcgcagcgaactggccgcaggacgtgccgtcatgccttgcaatatc
aaccatcccgaagctgagcccatgatcatcggctcgaagttcctcaccaagctcaacgcc
aatatgggcaattcggcggtcacttcgtctattgacgaggaggtggagaagctcacgtgg
gccaccaaatggggtgccgacactgtgatggatctgtctaccggcaacgacattcacacc
actcgtgaatggattttgcgcaactcccccgtaccgattggcaccgtgccaatgtatcag
gcgctcgaaaaggtggaggatgatgcttccaagctcagctgggaactgttccgcgacacg
gtgatcgaacagtgcgaacagggcgtggactatatgacgattcatgccggtgtgctgctg
cgtttcgtgccgttgacggcgaaccgtatgacaggcatcgtttcgcgtggcggttcgatc
atggctgaatggtgtttgcagcatcatcaggaaagcttcctgtatacgcatttcgatgaa
ttgtgcgagatcttcgccaagtacgatgtggcgttctcactgggtgatggacttcgtccg
ggatcgcttgccgatgcgaacgatgcggcacagtttgccgaactgatgactttgggcgag
cttacccaacgtgcatgggaacacgacgtacaggtgatgatcgaaggacctggccatatt
ccgttcgacaccgtgcgcatgaacattgaaatggaaaaggcgatctgcaaggacgcgccg
ttctacacgcttggaccgctcaccactgacaccgctcctggctacgaccacatcacgtcg
gcgatcggcggtgtggaaatcgcccgctatggtactgccatgctgtgttatgtgacgccg
aaggagcatcttgggttgccgaataaggacgatgtgaagcaaggtgtgatcgcatacaag
atcgcctgccatgcagctgatattgccaagcatcatccgcatgccatcgaccgcgacaat
gccatgagcaaggcacgtttcgaattccgttggctcgaccagttcaatctgagctacgat
ccggacaccgccatcgcgttccatgatgatactttgccggccgagcctgcgaaaatggcg
catttctgttcgatgtgcggtccgaagttctgttccatggccatcagccaaaacatccgc
aaaaaattcggtaatgccgaagcacaggaaaagctcgtcgccgacgcgcaaaccatcgct
gccggtatgcaggccatgagcgagcgcttccgcgagcagggcggccatctgtaccagtag
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