Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1099
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Entry
BBKW_1099 CDS
T04223
Name
(GenBank) holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBKW_1099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_1099
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBKW_1099
RecFOR pathway proteins
BBKW_1099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BAQ29234
LinkDB
All DBs
Position
complement(1285020..1285637)
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AA seq
205 aa
AA seq
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MIGMLHGQVDSIDAVSAIIEVGGVGYETRMPSADLASMHAGQTVKVYTSLNVSQDAITLY
GFSSLASKRMFLQLQKVSGIGPKVALSLLSTLPPERLARAVADGDATALAKAPGLGKKGA
QKIILELKGSIDLSQIEGASPETRSTEDTGSEQVVEGLMSLGWRQQDAVHAVQDVCESNH
IDIPLGDDDVPRVLKLALASLDRGR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggcatgctgcatggccaagtcgattccattgacgcggtttcggcgatcattgag
gtcgggggagttggctatgagaccaggatgccttcggcggatctggcttccatgcacgcc
ggtcaaacggtgaaggtgtacacgtcgttgaacgtttcgcaggatgcgatcacgctgtat
ggcttttcctcgctcgcatcgaaacgtatgttcctgcaattacagaaggtcagtggcatt
ggcccgaaggttgccctttccttgctttcgacgttgcctccggaacgtttggcgagagcc
gtggcagatggcgatgccactgcgctggcgaaagcgccgggattaggtaaaaaaggtgcg
caaaaaatcatccttgagcttaaagggtccattgaccttagccagattgaaggcgcttct
cctgaaacacgttccacggaagatactggttcggaacaggtggtggaaggcctgatgtct
cttggatggcgtcaacaggatgccgttcatgccgtgcaagacgtctgcgagagcaaccat
atcgatattccactgggagacgatgacgtgcctcgtgtgctcaaactcgcgttggcgtcc
cttgatcgaggtaggtga
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