Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1168
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Entry
BBKW_1168 CDS
T04223
Name
(GenBank) phenylalanyl-tRNA synthase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBKW_1168
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bks01007
]
BBKW_1168
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bks03016
]
BBKW_1168
Enzymes [BR:
bks01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BBKW_1168
Amino acid related enzymes [BR:
bks01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BBKW_1168
Transfer RNA biogenesis [BR:
bks03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BBKW_1168
Prokaryotic type
BBKW_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAQ29303
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All DBs
Position
complement(1358952..1361561)
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AA seq
869 aa
AA seq
DB search
MPMVDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQ
KNGKIINWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFKIE
PRKTYGHISNGMCASERELGLGDNHDGIILLRKYGFTPEEYEKLQPGDDAMHLLHLDEPL
LEINITPDRGYAFSYRGVSREYHHSTGAAYTDPAVALNEKAPITKGLPEGTKTDIEVIVD
DNNPIHGVVGCDRYYARAVKGFDPASHTPNWMRRRLARAGMRSISLAVDVTNYVMLDLGQ
PMHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLNVEDLLITDSPNGERGSRVLGIAGV
MGGMYGEVTADTKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMA
AELMVKYGNGEPSEHPTDFNTVSNRRPILFKASEVARVAGLDTDVNTISDILTDIGCSVA
GGGNGEFSVVPPSWRPDLNEPCDLVEEVARLVGYDEIPVTVPPAPVEGRVGLTAEQLRKR
QVADELAEYGMVETLSYPFVGDEDYKNLALDAAETKNVSVEIANPLAGDRPFLRRDIIPT
LAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPDQPM
HVAGILTGNAVDSGWLGERRAVDWSDAVEAVQRISDRIGAALTLDQPKAEDVPAQWHPGR
AARVMAGDVFVGMVGELHPHINEALGFSAHSAAFELDLTALFATLSGKPVQAKPISTFPP
VKQDLAFTVSTDVTAAELKQVIVEAAGDSLESIELFDVYTGDQLGEGEKSLAYAVTFRAP
DKTLASEDSEAIRKRIVDEASKLGAQLRA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggttgacattgattggctcaaggaccatgtcgaggttccggaaggccttaca
tacgaacagcttgccaaagatctggtgaaggtcggtctcgaagaggaagagatccacacc
tcccagctggtcggtccgatcgtcgtcggctatgtggtcgatgccactccggaaccgcag
aagaacggcaagatcattaactggtgccatgttgacgtcggcgacgaatacaacgagacc
gatgagaacggcaacaaggtgccgcgcggcatcatctgcggcgcgccgaacatggctgcc
ggcgaaaaggtcgttgtgacgcttcctggcgctgtgctgccgggcgatttcaagatcgaa
ccacgcaagacctacggccatatttccaacggcatgtgcgcttccgaacgtgagcttgga
ttgggtgataaccatgacggcatcatcctgctgcgcaagtacggcttcaccccggaagag
tatgagaagctccagccgggcgacgacgcaatgcacctgctgcacttggatgagccgctg
ctggagatcaacatcactccggatcgcggctacgcgttctcataccgtggcgtgtctcgc
gaataccatcattccactggtgcggcctacaccgatccggctgtcgctctgaacgagaag
gcgccgattaccaagggcctgccggaaggcaccaagaccgacatcgaagtgatcgtcgac
gacaataatccgattcacggtgtggttggatgcgatcgctattacgctcgcgcggtcaag
ggattcgatccggccagccatacaccgaactggatgcgtcggcgcctggcccgcgctggc
atgcgttccatctccttggccgtggatgtcaccaactatgtgatgctcgacttgggacag
ccgatgcatgcctacgatctggacaagatcgaagggccgatcgtggtgcgtcgcgccaac
gaaggtgagaagctcaccacgttggacggcaaggatcacgatttgaatgtcgaagatctg
ctgatcaccgattccccgaacggcgaacgcggctcccgtgtgcttggtatcgcaggtgtg
atgggcggcatgtatggcgaggtcactgctgataccaagaacatcctgctggaatccgcg
cacttcgatcaggtgtcgatcgcgcgttccgcacgccgtcacaagattccgtccgaagcc
tcccgtcgtttcgaacgcggtgtggacgaccagctgcagccggcagccgcccaaatggcc
gccgaactgatggttaagtacggcaatggcgagccgagcgagcacccgaccgacttcaac
accgtctccaaccgccgtccgatcttgttcaaagcttcggaagtggctcgtgtggccgga
cttgacacggatgtgaataccatcagcgacattcttaccgatatcggttgctccgtcgcc
ggaggtggcaatggcgagttttccgtggtgccccccagttggcgccccgatttgaacgag
ccgtgcgatttggttgaggaagtggcgcgtcttgtcggatatgacgagattcccgtcacc
gtgccgccggcaccggtcgaaggcagggtcggtctgactgccgagcagctgcgtaagcgc
caggttgccgatgaacttgccgaatacggtatggtggaaacgttgagctatccattcgtc
ggcgatgaggattacaagaacctcgcgctggacgccgctgagacgaagaacgtcagcgtg
gagattgccaacccgctcgccggtgatcgtccgttcctgcgtcgcgatattattccaacg
ctggcacagaccgttcagcgcaatctgcgtcgcggcgtggagaatgtgtcgctgtatgag
atcggccacgtgtatctgtgggatccgaacgcccctgcgattccagcgttgccgggtgcc
gtcaagccgacggacgagcagcttgccgcgcttgatgccggtcttccggaccagccgatg
catgttgctggtattctgaccggcaacgccgttgactccggttggctgggcgagcgccgc
gcagtggattggtctgacgccgtcgaggcggtgcagcgcatctccgaccgtattggtgca
gctctcacgctggatcagccgaaggctgaagatgtgccggcacaatggcacccgggccgt
gcggcccgcgtgatggccggtgacgtattcgtcggcatggtcggcgagcttcacccgcac
atcaacgaggcgttgggcttctcggcccattccgcggcctttgagttggatttgaccgcg
ctgttcgccacgttgagcggcaagccggtgcaggccaaaccgatctccaccttcccgccg
gtcaagcaggacttggctttcacggtgtccaccgacgttacggccgctgaactcaagcag
gtcatcgtcgaagccgccggagacagtcttgaaagtattgagctgttcgatgtgtacacc
ggcgatcagctgggcgaaggcgaaaagtccttggcctacgcggtcacattccgcgctccg
gataagactctcgcttccgaagacagcgaagccatccgcaagcgtattgtggatgaagcg
tccaaactgggtgcgcagctgcgtgcctga
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