Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1199
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Entry
BBKW_1199 CDS
T04223
Name
(GenBank) putative helicase
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ERCC3_RAD25_C
AAA_22
GCIP_C
IcmF-related_N
Bd2520-like_N
Motif
Other DBs
NCBI-ProteinID:
BAQ29334
LinkDB
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Position
complement(1396864..1400685)
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AA seq
1273 aa
AA seq
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MADTLSWLSDELRSECSQPVLQRARGIANQWCAKMSDLHCLNDSDSDRITLHANMRGTTS
PSSRYEVQATLDLHDELFLARYCSCPAFNGSQHGYGTYSSAYSPSYRNNPNYRSFDDDDD
EYDYVDDYDDFGSGSTFGHVQDDDEFASEPAGGRRYTGMCKHVAAMLLLFLDQPERFRGF
KRSGVTSPILSDYMRALDAKNDNTGQSAQLDVLKRIVDAKSRLADEQRGAITQGAAKIKR
KSGSIMVKPGSVCLKPTLIMNRELWSLTLKIGCGDASYIIKNISKFIADMRNGAYVSYGQ
KLSFTHIPDMLEPFSLQLFRFLQGVVGSRVAAQLQNNYYYAPDVRIEREIMLTDGELCDL
LNLFEAEPQQDYIEDVLIARGPLEAPKHEGRERARQLTPDEFAHTDDTAPGYVEVATPRE
SRSHTIAIFDGNPQFRFIAEYVKEGASSGVRITSNRTITDRIVGQRGVYLMSAEHNGTPT
DSHMMPVSGLFRCTDSILPAVDALMTLCASNVSDGVFIAENDWPMFARTILPKLTEVGIG
FDIPQEVAEQMGVDCQIEFYLDRDLQGITCEAVARYGDFVFQLVPTAKALRGVINPDSRS
KAALIKRDTARESFAVQVVRQLFPTWSSIDVARVREEDEQTILLLLTEGVDILRSVGQVF
STAAFDGMMMPSSPTVKVGLSIDSNLVEISPIANEVPMNEVGALLNSYRRNRRYHRFRDG
TFVDLKKADLHELDQIATDLDLNEKQIDSGRITIPGYQAFLLDAQVDDDGKSESFVDYVN
DVKIIDPKRYEVPSKLKNVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLVE
ARKGGGPALIVCPASLVYNWAAECEKFTQDLTIEVVAGTKAQRRKLIATVAQQWNNSTET
NETQQTDVVITSYDLLRRDVDDYADCRFALMALDEAQYIKNHATKLAKAVKQITAEHRFA
LTGTPIENRLSELWSIFDFLMPGLLGTYTKFREKYEQPIMAPGPEHSVMADKLQALIGLF
IKRRLKKDVLTDLPDKFENVLTVKLEGEQRKLYAAHEQRLRATLTKTEDADFNTKKIRIL
AEFTLLREICCDSRLVYADAKNASAKLDAICELVSTCMDEGKKVLVFSQFTSFLDLIGTR
LAEHGVDFYTITGETPKKRRVELVDEFNGNDVPVFLISLKAGNTGLNLVGASVVVHADPW
WNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKSELAQQFTDGTASGGV
GTLSKDDLLGLLS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
ttggcggatactttgtcatggctttccgacgaactacgcagcgaatgcagtcagcctgta
ttgcagcgtgcccgtggaatcgccaaccagtggtgtgcgaaaatgtcggatctgcattgc
ctgaacgactccgattccgatcgcatcaccctgcatgccaatatgcggggcaccacctca
ccgtccagccgatacgaagtgcaggccacgcttgatttgcatgatgagcttttcttggcc
aggtattgctcctgcccggcgttcaacggttcgcagcacggttatggcacgtattcgtcg
gcatattcgcccagctaccgcaacaatccaaattatcgcagtttcgacgatgatgacgat
gaatacgattatgtcgacgattatgatgatttcggttcaggatcgacgttcggccatgtg
caggacgatgacgagttcgcttcggagccggctgggggacgccgctatacgggcatgtgc
aagcatgtcgccgcaatgctgctgctgtttcttgaccagcccgaacggttccgcggattc
aagcgaagtggcgtgacttcgcctatcctctccgactacatgcgtgcgctggatgcgaag
aatgacaataccggtcaaagcgcgcagcttgacgtgctcaagcgcatcgtcgacgcgaaa
agccgtctcgccgacgaacaacgaggcgccattacgcaaggggccgcgaaaataaaacgc
aagagcggttccatcatggtgaaaccgggaagcgtatgtctgaagcccacgctgattatg
aaccgtgagctgtggagcctgacgctgaaaatcggctgcggcgacgcaagttatatcatc
aaaaacatttccaaattcatagccgacatgcgcaacggggcatacgtgtcatacgggcag
aaactctcgttcacccacattccggacatgctcgaaccgttctcgctgcagctgttccga
ttcctgcaaggtgttgttggatcacgtgtcgctgcacagctgcagaacaactactattac
gcgccagacgtgcgtatcgaacgtgaaatcatgcttaccgatggggaattgtgcgatctg
ctgaacctgttcgaagcggaaccgcaacaggactacatcgaagacgtgctgatagcacgt
gggccgctggaagctcccaagcatgaggggcgtgagagggcgcggcagctcactccggat
gagttcgcccatacggatgacaccgctccgggctatgtcgaagtggccacgccaagggag
tccagatcgcatactatcgccatattcgatggcaatccgcaatttcgattcatcgccgaa
tatgtgaaggaaggcgcttcgtcgggcgtgcgtatcacgtcgaaccgtaccatcacggat
cggattgttgggcagcggggcgtgtacctcatgagtgccgaacataacggcactccgacg
gattcccatatgatgccagtgagcggactcttccgttgcaccgacagcatcctccccgca
gtggacgcgttgatgacattgtgcgcgtcgaacgttagcgatggcgtgttcatcgcggaa
aacgactggcccatgttcgcacgaacaatactgccaaaacttaccgaagtgggcattggt
ttcgatattccgcaggaagtcgccgaacagatgggagtcgactgccagatcgaattctac
ttggaccgtgatctgcaaggcatcacctgtgaggctgtggcacgatacggcgatttcgtg
ttccagttggtgccgaccgctaaagcactacgaggcgtgattaatccggattcgcggtcg
aaagcggcgctcatcaaacgagatacggctcgcgaatcattcgcggtgcaggtggttcgc
cagcttttcccgacatggagttccattgacgtggcgcgggttcgcgaggaagacgaacag
acgattctgctcttgctcaccgaaggcgtggatatcttgcgctcggtcggacaggtgttc
tccacagccgcgttcgacggcatgatgatgccaagcagccctacagtgaaggtcggactg
tccatcgactcgaatttggttgagatttcgccgatagccaacgaagtgccgatgaacgag
gtcggtgcgttgctgaattcctaccgcaggaaccgccgctaccatcgcttcagggacggt
acattcgttgatctgaagaaagccgatctgcatgaacttgatcagattgccacagatctt
gaccttaatgagaaacagattgattccggaagaatcaccattcccggatatcaggcgttc
ctcttggatgctcaagttgatgatgacggcaaaagcgaatcgttcgtcgactatgtcaac
gatgtgaaaatcatcgacccgaaacgatacgaagtgcccagcaagctcaaaaacgtactg
cgcccataccaagtggaaggcttccaatggctttccaccttgtgggacaaaggcttcggt
ggcattctcgccgacgaaatgggtttgggtaaatccgtgcaactgctgtcactggtggaa
gctcgcaaggggggcggcccagcgttgattgtctgcccggcatccttggtatacaactgg
gctgccgaatgcgaaaaattcacgcaggatcttaccatcgaagtcgtagcaggcacgaag
gcacaacggcgcaaactcatcgcaaccgtggcgcagcaatggaacaattcgactgaaacc
aatgaaacgcagcaaaccgatgtggtgatcacctcttatgatttgctgcgtcgagatgtg
gatgattatgccgactgccgattcgcattaatggcacttgacgaagctcaatacatcaaa
aaccatgccaccaaactagccaaagccgtcaagcaaatcaccgccgaacaccggttcgcg
ttaaccggaacgcccatcgaaaaccggttgagcgaactgtggagcatattcgacttcctc
atgcccggattgctcggaacctacacgaagttccgagaaaaatacgaacagccgatcatg
gcacccggtccggaacattccgtcatggctgacaaactgcaggctttgattggactgttc
attaaacgacgtctgaaaaaagacgtgcttaccgatttgcctgacaagttcgaaaacgtg
ctcaccgtcaaattggaaggcgaacagcgcaaactctatgcggcacatgagcaacggttg
cgtgccacccttaccaaaaccgaggatgccgatttcaataccaagaaaatccgtattctt
gccgaattcacgttgctacgcgaaatctgctgcgattcgagactcgtctatgcggatgcg
aaaaacgcttccgccaaacttgacgccatttgcgaactcgtatccacgtgcatggacgaa
ggcaagaaagtgcttgtattctcgcagttcacttcatttcttgacctgattggtacacgt
ttggctgaacatggcgtggacttctacaccatcaccggcgagacaccgaagaaacgccgt
gtggaactggtggacgaattcaacggcaacgatgttcccgtatttctcatctcgctcaag
gcgggcaacacgggactgaaccttgtgggcgcatccgtagtggtgcacgccgacccatgg
tggaacgccgccgcgcagaaccaggccaccgaccgtgcgcatcgtatcggccagacgcag
gatgtgaacgtgtaccaaatcgtagccaaagacaccatcgaggaacgcatcctcaaactt
caggaaaagaaaagcgaactcgcccagcagttcaccgacggcaccgcatccggaggcgtc
ggcacactcagcaaagacgacttgctcggcctgttgtcgtga
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