Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1359
Help
Entry
BBKW_1359 CDS
T04223
Name
(GenBank) putative exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBKW_1359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_1359
Enzymes [BR:
bks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BBKW_1359
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBKW_1359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
PIF1
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAQ29494
LinkDB
All DBs
Position
complement(1583611..1584471)
Genome browser
AA seq
286 aa
AA seq
DB search
MTITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDPIFDEFGFEYATAG
RVDDQSELNRMNEICRIKGRAGVGLLSTLPVVEKRYGLPGLEEDVDSGRWIEADVQTPQG
YVITVTCVYVHAGNTDDPEKMKQKYRFLDTMLARMEQLRDEAAHGGKQAVLCGDFNIAHT
PLDIKNAKANETHAGFLSEERAYVDKWLGELEFVDVMRDLAGDIQGPYTWWSQRGRAFDN
NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcacaatcacgacttcgaatgtgaatggaatccgcgcggcgaaacgcaaaggc
atcgagcaatgggctgcgaaaaacacgccggacgtatggtgcatgcaggaggtacgtgcc
ccccaaaacgaaatcgatcccatcttcgacgaattcggtttcgaatacgcgaccgccgga
cgcgtcgatgaccaaagcgaactcaatcgcatgaacgaaatctgccgtatcaaagggcgt
gccggcgtcggtttactgtcgacattgcctgttgtcgaaaagcggtatggtttgccggga
cttgaggaagacgtcgattccggacgctggatcgaagcggacgtgcaaactccgcaaggc
tatgtcattaccgtgacctgcgtgtatgtgcatgcgggaaataccgatgatccggaaaaa
atgaagcagaagtaccgtttcctcgacaccatgctggcacgcatggaacagttgcgtgac
gaggcggcacacggcggaaaacaagcggtgctctgcggtgatttcaacatcgcacacacg
ccgctcgacatcaaaaacgccaaagccaacgaaacgcatgccggattcctttccgaggaa
cgcgcctatgtggacaaatggttgggagaactggaatttgtggatgtgatgcgtgatctc
gccggagatatccaagggccgtacacatggtggagccagcgcggtcgtgcattcgacaac
aatgtcggctggagaatcgactatcagttcgcaacaccggaactggcggaaacggcctgc
ggattcgtgatcgataaggctccgacctacgacctgcgctggtccgatcatgcgccgctc
agcattatgtatgacatttaa
DBGET
integrated database retrieval system
