Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1478
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Entry
BBKW_1478 CDS
T04223
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00300
Lysine biosynthesis
bks00470
D-Amino acid metabolism
bks01100
Metabolic pathways
bks01110
Biosynthesis of secondary metabolites
bks01120
Microbial metabolism in diverse environments
bks01230
Biosynthesis of amino acids
Module
bks_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBKW_1478
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBKW_1478
Enzymes [BR:
bks01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BBKW_1478
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAQ29613
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Position
complement(1718178..1719077)
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AA seq
299 aa
AA seq
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MSIPSIVYKAHATGNDFVVYLDAEGTYEPTVDEVRFLCDRHFGIGGDGLIRLTHPQAVSD
LNDKQIAVCAAGNADWFMDYRNADGSLAEMCGNGTRAITLFAQRQGIAGQPGGEPFRLGT
RAGVKVLTSLGDVPTLGNDVFQVEMGSWKCGDLDGYEVTIPGTAGSARGTFVDMGNPHVV
AVIEDAFSSLPTVEQLDLVTKPVVSPQIESDQNVEFVRIDEQSEGDNEGSATMRVSERGC
GETLSCGTGLCATAITLRAKTGIDHWTITVRGGTLRVDVTDDDVKLTGSATIIGKIELL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccaagcattgtttacaaagcacacgccactggcaacgatttcgtggtgtat
ctagacgccgaaggcacgtacgagcctaccgtcgatgaagtgcgattcctgtgcgaccgt
catttcggtatcggtggcgacggtttgatccgccttacacatccgcaggcggtgtccgat
ttgaatgacaagcagattgccgtctgtgctgccggcaatgcggattggttcatggactac
cgcaatgcggacggctcgttggctgagatgtgcggcaacggcacgcgtgcgattaccctg
ttcgcgcaacggcagggtattgccggtcagccgggcggtgaaccgttccgtctcggcacc
cgtgccggtgtgaaggttctgacttcgcttggcgatgtgccgactcttggcaatgacgtg
ttccaggttgagatgggttcatggaagtgcggcgatcttgatggatacgaagtgacgatt
cccggcacggccggttccgcacgcggcacgttcgtggacatgggaaatccgcacgtggtc
gccgtcatcgaagacgcgttctccagcctgccgaccgtggaacagcttgacctggtgacc
aagccggtcgtctcaccccagatcgaaagcgatcagaacgttgaattcgtgcgcatcgac
gaacaaagcgaaggtgacaacgagggcagcgccaccatgcgcgtcagcgaacgcggctgc
ggtgagacattatcgtgcggtacgggcctgtgcgccaccgccatcaccctgcgtgccaaa
acaggcatcgaccattggacgattaccgtgcgtggcggtactttgcgcgtcgacgtgacc
gacgacgatgtgaaactcaccggatcggccaccatcatcggcaaaattgaactgctgtga
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