Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1664
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Entry
BBKW_1664 CDS
T04223
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks00300
Lysine biosynthesis
bks00470
D-Amino acid metabolism
bks01100
Metabolic pathways
bks01110
Biosynthesis of secondary metabolites
bks01120
Microbial metabolism in diverse environments
bks01230
Biosynthesis of amino acids
Module
bks_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBKW_1664
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBKW_1664
Enzymes [BR:
bks01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBKW_1664
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAQ29799
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All DBs
Position
complement(1973527..1975107)
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AA seq
526 aa
AA seq
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MAVTPIWPAGSSVNEQGEITFHGRTAESLLNEFGSPLYVIDTDDVRARAAKFVKSAANAF
NNTVTHVSFAGKALLSKEICRIVTKSGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
AEIELAITEGFAKIVVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPVGADASKLNVLDDLTDVTPAGSNARLGESETTPGENAERQLQYDIKYPYDM
SHEKVSEGDRKLAEAMTMVADGPALAVLKEIYRHQDVLELVGVHSHIGSNIHDADAFIQA
AKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDLDTELVRLASAVTTVNRALG
MPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQLAGTAKDKAGNPVTERVYVSVDGGMSDN
IRPALYGSDYTAKIANREGSSETKLCRVVGMHCESGDIIVNEVRLPADIQRGDVLAVPVT
GAYGRTMASNYNQALIPAVVAVSKQDAHVMIRRQTVEDLLDWDVSE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcacccccatctggccggccggctccagtgtgaacgagcaaggtgaaatcacg
ttccatggtcgcactgccgaaagcctgctgaacgaatttggctcaccgctctacgtcatc
gacaccgatgacgtgcgagcccgtgccgccaaattcgtcaaatccgcggcaaatgcattc
aacaacaccgtaacccacgtcagtttcgcaggaaaagcactgctttccaaggaaatctgc
cgtatcgtcaccaaatccggcatgctgatcgacacatgcaccatgggcgagatgcgcatc
gcgctcgccgcaggtgttcccggaagacgactcgtgctgcacggcaacaataagtccgat
gcggaaatcgaactcgccattaccgaaggcttcgccaaaatcgtggtggacgagccgaac
gagccggcccgtattgccgaaatcgccaagcgtctcggcaagcgcgctcgtgtgatgttg
cgtgttacgtccggcattcatgcgggcggccacgagttcgtgtctaccgcgcatgaggac
cagaagttcggtgttgccttgctgccggttggtgccgatgcaagcaagctgaacgtgctt
gacgatttgactgacgtgacccctgcggggtcgaatgcacgcctaggtgaaagcgaaacc
actccgggcgaaaacgcagaacgccagctgcagtacgacatcaaatacccgtacgacatg
agccatgagaaggtttccgaaggcgaccgtaaactcgccgaagccatgaccatggtggct
gatggccccgcgctcgccgtgttgaaggagatctaccgccatcaggatgtgctcgaattg
gtcggcgtgcattcgcatatcggatcgaacattcacgatgcggacgcctttatccaggcc
gcgaagcgcatgatgctgctacgcaagaccttctacgctaccgacgcatacaccctgccg
gaggttgacttgggcggcggctattccgtggcttacaccgatggtgaggattccatggac
ctcgatacggaacttgttcgtcttgccagcgcggtcaccaccgtgaaccgtgcgctcggc
atgcccgctccggtcatttcgttcgaaccgggccgttggacggtcgccccgaccggcgtc
accctgtaccgcgtgggtacggtcaagccggtgcagcttgccggaaccgcgaaagacaag
gctggcaatccggttacggaacgcgtgtacgtgtctgtcgacggcggcatgagcgacaat
attcgcccggcattgtacggatcggattacactgcgaaaatcgccaatcgtgagggttcc
agcgaaaccaagctgtgccgtgtggtcggcatgcactgcgaatcgggcgatatcatcgtc
aacgaggtgcgtcttcctgccgatattcagcgcggtgacgtgctggcggtgcctgttacg
ggtgcatacggtcgtacgatggccagcaactacaatcaggcgctgattcctgcggttgtt
gccgtatccaagcaagacgcgcatgtgatgattcgccgtcagacggtcgaagatctgctg
gattgggatgtgagcgaatag
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