Halalkalibacter krulwichiae: BkAM31D_00865
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Entry
BkAM31D_00865 CDS
T04947
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bkw
Halalkalibacter krulwichiae
Pathway
bkw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BkAM31D_00865 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bkw03021
]
BkAM31D_00865 (rpoA)
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_00865 (rpoA)
Enzymes [BR:
bkw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BkAM31D_00865 (rpoA)
Transcription machinery [BR:
bkw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BkAM31D_00865 (rpoA)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BkAM31D_00865 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARK28542
UniProt:
A0A1X9MDM9
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All DBs
Position
157334..158278
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIEAVEVSEDAKYGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDS
VLHEFSTIEGVVEDVTTIILNLKKLALKIYSDEEKTLEIDIQGEGVVTANDITHDSDVEV
LNPDLHIATLAKGAHLHMRLTAKRGRGYILAEGNKNEDQPIGVIPIDSIYTPVSRVNYQV
ENTRVGQVTNYDKLTLDVWTDGSIRPEEAVSLGAKILTEHLNIFVGMTDQAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTHKSEEDMMKVRNLGRKSLEEVQ
EKLGELGLGLRKEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccaaaaattgaagcggttgaagtaagtgaagacgcaaagtat
ggaaagtttatcgttgaaccattagagcgtggatatggtacaactttaggaaactcccta
cgtcgtattcttctatcctctttgcctggcgctgctgtaacatccgtgcaaattgattca
gtgttacatgagttctcaacaattgaaggtgttgtagaagatgtaacaacaatcattttg
aacttaaaaaaactcgctctcaaaatctactcagatgaagagaagactcttgaaattgat
atacaaggggaaggggttgtaacagcgaacgatattacacatgacagtgatgttgaagtt
ctaaatccagatcttcatatcgcaacacttgctaaaggtgcgcatttacatatgcgttta
actgctaagcgtggtcgtgggtatatacttgctgaggggaataaaaatgaagatcaaccg
attggagttatccctattgattccatttacacaccggtttcacgtgtaaattatcaagtt
gagaatacacgcgtcggtcaagtaaccaactatgacaaactaactcttgatgtctggact
gacggaagcattcgtcctgaagaagctgtttcgttaggtgcgaaaatcttaactgagcat
ttaaacatctttgttggaatgacagaccaagcacaaaacgctgaaattatggttgaaaaa
gaagaagatcagaaagaaaaagttctagaaatgacaattgaggaactagatctatctgtt
cgttcttacaattgcttaaagcgtgcaggtattaatactgttcaagaacttacccataag
tctgaagaagacatgatgaaagttcgtaaccttggtcgtaagtcacttgaagaagttcaa
gagaagcttggagaacttggactaggacttcgtaaagaagaatag
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