Halalkalibacter krulwichiae: BkAM31D_03115
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Entry
BkAM31D_03115 CDS
T04947
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bkw
Halalkalibacter krulwichiae
Pathway
bkw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BkAM31D_03115 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_03115 (mutM_1)
Enzymes [BR:
bkw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BkAM31D_03115 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BkAM31D_03115 (mutM_1)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BkAM31D_03115 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zf_2nd_IFT121
MgtE_N
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ARK28929
UniProt:
A0A1X9M661
LinkDB
All DBs
Position
544825..545634
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEMENYKRLLTERLVGKTIKGVNITRGKTVNLPIEPFINEVQGRKIVMIDRRAKYL
IFKLDSGKNLLLHLMLGGLMYVGNENDSPDRTKQVTLDFGGVQLFFIGLRLGFLHVLTSH
KLDEQFNELGPEPLDPQFTLVAFNELMEKRRGLIKTTLVNQKIISGIGNLYSDEICFIAE
LLPTRTMNELSDQERSKLYTSMQTVLKRGLSLGGYIDLPVFQGDTLTGSYNDHCYVYDRE
GEPCPRCQHLIIKDEVSSRKTFFCKMCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgagatggagaattataagcgccttttaacggaaaggttagttgga
aaaacaataaaaggtgtgaacattacgaggggaaaaacggtaaatcttcctattgaacca
tttatcaatgaagttcaaggcagaaaaatagttatgattgataggagggcaaagtattta
atctttaagcttgattccggaaagaatttattgctccatctgatgcttggaggactaatg
tatgttggtaatgagaatgatagtccggaccgaacaaagcaagtgacacttgactttggc
ggagttcagctgttctttattggtcttcgattaggatttctgcatgttctaacaagtcat
aaactagatgaacagttcaatgaattaggaccagagcctctcgatcctcaatttacattg
gttgcttttaatgagctaatggagaaacgacgaggattgattaagacgacgttagtaaac
caaaagattatatcaggaattggcaacttatattctgatgaaatctgctttatcgctgaa
ttgttgccaacaagaacaatgaatgaattgagcgatcaagagcgctcaaaattatataca
agtatgcagactgtattgaagaggggattgtcattaggggggtatattgatttacctgtg
tttcagggagatacattaacaggttcttataatgatcattgctatgtctatgatcgggaa
ggagagccttgtccaaggtgccaacatttgattattaaggatgaagtttcttctcgcaag
acattcttttgtaaaatgtgccaacggtga
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