Halalkalibacter krulwichiae: BkAM31D_04745
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Entry
BkAM31D_04745 CDS
T04947
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bkw
Halalkalibacter krulwichiae
Pathway
bkw03410
Base excision repair
bkw03430
Mismatch repair
bkw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BkAM31D_04745 (recJ)
03430 Mismatch repair
BkAM31D_04745 (recJ)
03440 Homologous recombination
BkAM31D_04745 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_04745 (recJ)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BkAM31D_04745 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BkAM31D_04745 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BkAM31D_04745 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
OKR_DC_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ARK29221
UniProt:
A0A1X9MCD0
LinkDB
All DBs
Position
831671..834040
Genome browser
AA seq
789 aa
AA seq
DB search
MLKSKARWKIKEQASNQVDLLVNELKIDPLTAKLLINRGLETIESARGFLNKEEMCYHDP
FLLDDMDLAVRRIHAAVSRNEKILIFGDYDADGVSSTAVMYLALKSIGAEVDFYIPNRFT
EGYGPNEPAIRKAKEEGYQLVVTVDTGIAAVHVANVAKEIGLDFIVTDHHEAPPVLPDAY
AIINPKKPGCPYPFKGLAGVGVALKVAHALIGRIPSEWLDIAVIGTVADLVPLVDENRLL
VMEGLHALQSTDKPGLVELKKKCGILSQVIQADHVGFGIGPRINAAGRLDSADPAVALLL
TESHEEAELLASEIDDLNKERQAVVSEITEAAIQVVEDHYPPDENEVLVIAGEGWNAGVI
GIVASRLVERYYRPTIVLSIDNEKGLAKGSARSIEGFDMFAELSKSRDILPHFGGHPMAA
GLTMNASDLGELRKRLCQQAKEVLTADDFTPITAIDLVASVDEVSVTVIKQMEKLAPFGV
ANPTPKVLIQDVHLEQMRKIGSDANHLKVGFNQNGATLDGIGFHLGYLCEEITSAAKVSA
IGTLSINEWNGHVKPQLMIEDVAVSEWQLFDWRSIQRNRIVERLLTIPKENRMLIAFKEN
TKMSLGLEQFDITHVSTNMSNTTDLSGKYVVLLDTPEERQQLKGLFSMSETPNRIYTIFH
HESDSFFTSNPNRDHFKWFYAFLLKRKMFNMKQHSEDLAKHKGWSKQTVDFMSHVFYELG
FVTIDDGILTVTENPEKKNLDESKTYRMKQEQVYIENDFVYSSYMDLKQWFSQILQEKTR
DEKSSKETV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatctaaagcgagatggaaaataaaagaacaagcatccaatcaagtagaccta
ctagtaaatgagttaaagatcgatccgttaacagccaagttgttaatcaatagagggtta
gaaacgatagaatccgctagaggatttttaaataaagaagaaatgtgttatcatgatccc
ttcttattagatgatatggatctcgctgttcggcgaattcatgcggcggtgagtagaaat
gaaaaaatactcatattcggagattatgatgccgatggggttagtagtacagctgttatg
tacctggcgttaaaatcaataggtgcagaagtagatttttatattccaaatagatttact
gagggatacggtcccaatgaacctgctattcgtaaagcaaaggaagaaggttatcagttg
gttgtaacagttgatacaggcattgcagcggttcatgttgctaatgttgccaaggaaatt
ggacttgatttcattgttacagaccaccatgaggcaccaccagttttacctgatgcttat
gctattattaatccaaagaagcctggttgtccttatccatttaaagggttagctggagtt
ggagttgccttaaaagtagcacatgctttaataggaagaattccaagtgaatggttggat
atagcagttattggaaccgttgcagaccttgttccacttgtagatgaaaatcgcttgctt
gttatggaaggactccatgccttgcaatcaaccgataaaccaggcttagttgaactgaaa
aagaagtgtggaattttatctcaggttattcaagctgatcatgtagggtttggaattgga
ccgaggataaatgcggcaggacggttggactcagctgatcctgctgttgctttgctttta
actgagtctcatgaggaagctgagttacttgcttcggaaatcgatgatttaaataaagaa
cgtcaagcggttgtgagtgaaataacagaagctgctattcaagtcgttgaagaccattat
cctcctgatgagaatgaagtacttgttattgcgggagaaggatggaatgcaggggtaatt
ggaattgtcgcttctcgacttgtagaaaggtattatcgaccaacaattgttttaagtatt
gataatgaaaaaggacttgctaaaggatctgcaagaagcatagaaggttttgatatgttt
gctgaactatctaaaagccgcgatattcttccgcattttggtggacatccaatggctgca
ggactaacaatgaatgcttctgacttaggtgaattacgaaaaaggttgtgtcagcaagca
aaggaagttcttactgctgatgactttactccaattacagcaattgatttagtggctagt
gtcgatgaggtttcagttactgtcattaagcaaatggagaaacttgctccctttggagta
gctaacccaacacctaaagtacttattcaagacgtccatttagagcaaatgaggaaaatt
ggaagtgacgcaaatcatttaaaagtgggttttaatcaaaatggagctacattagatggg
attgggtttcacctaggctacttatgtgaagagatcacatcagcagctaaagtttcagca
attggaactttgtcaattaatgagtggaatgggcatgtgaaaccacaattaatgatagag
gatgttgctgtttctgaatggcaactatttgattggcgcagtatccagcgcaatcgaatt
gttgagaggctattaacaattccaaaagaaaataggatgttaattgcctttaaggaaaac
actaaaatgagcttaggtcttgagcagtttgacattactcatgtttcaactaacatgagt
aacacaacggacctttctggtaagtatgttgtgttattagatacgcctgaggagagacaa
cagttgaaaggtttattttcaatgagtgaaacaccaaatcgtatatatacgatttttcac
catgaaagtgattctttctttacaagtaatccaaatagagatcattttaagtggttttac
gcctttcttttaaagcgaaaaatgtttaatatgaaacagcatagtgaggatttggcgaag
cataaaggttggtcaaaacaaacggttgatttcatgtcacacgtgttttatgagcttgga
tttgttacaatagacgatggaatcttaactgtaactgaaaatccagaaaagaagaacctg
gatgaatctaaaacataccggatgaaacaagagcaagtatatatagaaaatgattttgta
tactcttcgtacatggatttaaagcagtggttctcacaaatacttcaagaaaaaacaaga
gatgaaaagtcgagcaaggagacggtgtaa
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