Halalkalibacter krulwichiae: BkAM31D_04875
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Entry
BkAM31D_04875 CDS
T04947
Symbol
recD2_1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bkw
Halalkalibacter krulwichiae
Pathway
bkw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BkAM31D_04875 (recD2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_04875 (recD2_1)
Enzymes [BR:
bkw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BkAM31D_04875 (recD2_1)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BkAM31D_04875 (recD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
HHH_5
AAA_22
AAA_12
AAA_28
DEAD
AAA
T2SSE
NPHP3_N
AAA_16
NAT10_TcmA_helicase
NTPase_1
nSTAND3
UvrD_C
DUF4926
AAA_17
ABC_tran
TsaE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ARK29240
UniProt:
A0A1X9M9F6
LinkDB
All DBs
Position
856284..858605
Genome browser
AA seq
773 aa
AA seq
DB search
MNEESILEEERTIERGFIKGNVNHIVFRNEENFYTVALIRVQQTNEEFKEKTITVVGVLP
KLEQDETFLFFGQMIQHPKFGVQYQVEQFRRDLPQTKHGIIQYLSSGRFPGIGLKTAESI
VDVLDERAITRIVEDRSVLSDIPKLSKEKADSLYEQLVDQQGVEQVLMMLSKHGFGVELS
LKVYQAYGLQAIDIIQTNPYQLIADVEGIGFRKADLLGAAIGITGNHPDRIRAGCLFLIQ
ELCLQEGHVFIDKSSLTPHVISLLSSYEFKVEAHEVEQQIEVMHEDDLIFLEEERVYLKS
LYFAEKGIVSSVRRLLSEEIEEEFPEAEFLKALGKLEEEFNIEYAPSQKQAIQTALSSPL
MILTGGPGTGKTTVIKGIVELYARLHGISLDEKAYTKQNPFPILLVAPTGRAAKRMSEAT
ELPATTIHRLLGWKGGTGGFEKGDHEPLEGDLLIVDESSMVDIWLMNQLLKSVPKGMQVV
LVGDQDQLPSVGPGQVLRDFLDADVIPMVPLVDIYRQAEGSSIIELAHAMKQGKMPENLP
NPQKDRRFFPCQMDHVQQVVSQICENALKKGYTAKDIQVLAPMYKGSAGITELNRMLQQL
FNPHSDQRREISFGDVVYRTGDVVLQLVNNPDENVYNGDRGEIVAIFYAKENQEKQDQVV
ISFDGIEVIYQKKDLNQITHAYCCSIHKAQGSEFPIVVMPVVRSYARMLRRNLLYTGITR
AKQFLLLCGDLKAIHSAITQKEELHRNSMLQMKLRNLTVEKANQHNLEEKATN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaggaatcgatcttggaagaagagagaactattgaacgtgggtttataaaagga
aacgttaatcatattgtatttcgtaatgaggaaaacttttatacagtagcgcttattcgg
gtccagcaaacgaatgaagaattcaaagagaaaacaattacggtagttggagttttacct
aaattagaacaagatgaaacgtttttgttttttggtcaaatgattcaacatcctaagttt
ggtgttcaatatcaagttgaacagtttagaagggatctgccacaaacgaagcatggaatt
attcaatatttgtctagcggccgttttcctggtattgggttgaaaaccgctgagtcgatt
gttgatgtgttggatgaacgagctattacacggattgtggaggaccgttctgttttaagt
gatattccaaagttatcaaaggaaaaagcagatagcttatatgaacagcttgttgatcag
caaggggtcgagcaagtattgatgatgttatcgaagcacggatttggagtagagctatca
ttaaaagtgtatcaagcatatggattacaagctattgatattattcaaacaaacccttat
caattaattgctgatgttgaagggattggttttagaaaagctgatttattaggcgcagca
attggaataaccgggaatcacccggatcggattcgtgcaggttgtctttttttaatacag
gaactttgtctgcaagaagggcatgttttcattgacaaatcgagtcttaccccacatgtc
atatctctgctttcttcttacgaatttaaggttgaagcacacgaagttgaacaacaaatt
gaagtgatgcacgaagatgatctcatctttttagaggaagagagagtttacctcaaatca
ttatattttgctgaaaaagggattgtatcaagtgttcgaagactacttagtgaagaaatc
gaggaggaatttccggaagctgaatttctaaaagcattaggtaaattggaagaagaattc
aatatagagtacgcaccgtcgcaaaagcaagcgattcaaacggcacttagttcaccatta
atgatcttaacgggaggtcctggaacaggaaagacgactgtaattaaaggaattgttgag
ttatatgcaagattacatggaatttcattagatgaaaaggcatatacgaaacaaaatccc
tttccgatcttgcttgttgctccaacagggagagctgctaagaggatgagtgaagcaaca
gaattacccgctacaaccattcaccgactacttggttggaagggtgggactggtggtttt
gaaaaaggagatcatgaacctcttgaaggtgatttactaattgttgatgaaagctcaatg
gtggatatatggttaatgaatcagcttttgaaatctgttcctaaaggaatgcaggtcgta
cttgtaggcgatcaggatcagcttccatcagtcggacctggacaagtattacgtgacttt
ttagatgcagatgttattccgatggtacctttggtcgatatttatcgacaagcagaaggg
tcttctattattgagcttgctcatgcgatgaaacaagggaaaatgcctgaaaatctgccc
aatcctcaaaaagaccgtcgcttttttccttgtcaaatggatcatgtacaacaagtcgtt
tcacaaatatgtgaaaatgcattgaagaaaggctatactgcgaaggatattcaagtatta
gccccgatgtataaaggtagcgcagggattactgagttaaatcggatgctccaacaatta
tttaatcctcactcggatcaacgccgtgaaattagcttcggtgacgttgtttatcgaaca
ggtgatgttgttttacaattggtgaataatccagatgaaaatgtttataacggagaccgt
ggagaaattgttgccattttttacgccaaagaaaaccaagaaaagcaagatcaggtcgtg
atttcttttgatggaattgaagtcatctatcagaaaaaagatctcaatcaaatcactcat
gcctattgttgttctattcataaagcacaaggaagcgaatttccaattgttgtgatgccg
gtagtaaggagctatgcgagaatgctaagaagaaacttattatatacagggattactcga
gctaagcaatttcttctattatgcggagatttaaaagctatacattctgctatcacacaa
aaagaagaattgcatagaaattcaatgcttcaaatgaaattacgaaatttaacagtggaa
aaagctaaccaacataacttagaggaaaaagccacaaactaa
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