Halalkalibacter krulwichiae: BkAM31D_05065
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Entry
BkAM31D_05065 CDS
T04947
Symbol
hup_1
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
bkw
Halalkalibacter krulwichiae
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bkw03032
]
BkAM31D_05065 (hup_1)
03036 Chromosome and associated proteins [BR:
bkw03036
]
BkAM31D_05065 (hup_1)
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_05065 (hup_1)
DNA replication proteins [BR:
bkw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BkAM31D_05065 (hup_1)
Chromosome and associated proteins [BR:
bkw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BkAM31D_05065 (hup_1)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BkAM31D_05065 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
ARK29275
UniProt:
A0A1X9M748
LinkDB
All DBs
Position
complement(891342..891617)
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AA seq
91 aa
AA seq
DB search
MNKTDLINAVSEQADLSKKDASKAVDAVFDSITSALVEGSKVQLVGFGSFEVRERSARKG
RNPQTGQEIEIPATKNPAFKPGKQLKDAVNE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttaattaatgcggtatctgagcaagcagacctttctaaaaaggat
gcttctaaagcagttgacgctgtattcgacagcattacatctgcactagttgaaggtagc
aaagttcaattagttggatttggaagtttcgaagtacgtgagcgttctgctcgtaaaggt
cgtaatcctcaaactgggcaagaaattgagattccagctactaaaaatccagcattcaag
ccaggtaaacaacttaaagatgctgtaaacgagtaa
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