Halalkalibacter krulwichiae: BkAM31D_05490
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Entry
BkAM31D_05490 CDS
T04947
Symbol
cshB_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bkw
Halalkalibacter krulwichiae
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bkw03019
]
BkAM31D_05490 (cshB_1)
03009 Ribosome biogenesis [BR:
bkw03009
]
BkAM31D_05490 (cshB_1)
Enzymes [BR:
bkw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BkAM31D_05490 (cshB_1)
Messenger RNA biogenesis [BR:
bkw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BkAM31D_05490 (cshB_1)
Ribosome biogenesis [BR:
bkw03009
]
Prokaryotic type
rRNA helicases
BkAM31D_05490 (cshB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
PRAI
Motif
Other DBs
NCBI-ProteinID:
ARK29351
UniProt:
A0A1X9MCR7
LinkDB
All DBs
Position
965579..966931
Genome browser
AA seq
450 aa
AA seq
DB search
MIAENFKRFELQPFLIEALSEQGFTLPTDIQERLIPAIRNGRDVIGQSQTGTGKTLSFLL
PILDRIDTKKSEVQAVITAPTRELAGQLFDELKKLIAFCPENDQIHAKLLVGGTDRARAI
ESLKVQPHIVIGTAGRIGDLMDDQALQVYTASMLVVDEADQMLDMGFIADVDKVASRMAE
DLQMMVFSATIPEKLQPFLKKYMTDPRHVQVEPKHVTATKIEHRIVPLKHREKIKFVVEI
AQSINPYLAIVFTNTKEQADEVADAMTQAGLNVERLHGGLQPRQRKQVMKLVKEVKVQYL
VATDLAARGIDVKGVTHIINYGLPKDLDFYIHRVGRTARAGMDGIAYTIYENHDQTAVEK
LLKRGVKFTYYDFKQGDWIKLDRAPLGVPGKKKTSKQAADKSEPNKNKEQKRTGGKAVAK
AKKVKPGYKKKARFKQAKEEQRQRRIKKKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaaatttcaaaagatttgaactgcagccttttttaattgaggcactaagt
gagcaagggtttacactgcccactgatatacaagaaaggctaatcccagcaattcgaaat
gggagagatgttattgggcaatcacaaacaggaacagggaaaacactttcattcctgttg
ccaatcttagatcggattgacacgaaaaaaagtgaagtacaggcagtgatcactgcaccg
actcgagagctagcagggcaattatttgatgagttaaagaaattaattgctttttgtcct
gagaatgaccagattcatgctaaattgttagtaggtggaacggatcgggctcgtgccatt
gaaagcttgaaggttcaacctcatattgtaattggtacggcaggacgaattggtgattta
atggatgatcaagctttacaagtttatacagcttcaatgctagttgtggacgaagctgat
caaatgcttgatatgggttttattgctgatgtagataaggttgcttcaaggatggcagag
gatttacagatgatggttttctcggcaacgataccagaaaaactacaacctttcctcaag
aaatatatgactgatcctcgccatgtccaagtggaaccaaaacatgttacagcaactaag
attgaacatcgtatcgttccgctgaagcatcgtgagaagattaaatttgtagtcgaaatt
gctcaatcgattaatccatatttagcaatcgtttttacaaacacgaaagaacaggcggat
gaagttgctgatgcaatgacacaagcagggttaaatgttgaacgtcttcatggaggtctg
caaccaaggcagagaaaacaagtgatgaaacttgtaaaagaagtaaaagttcaatattta
gttgctacagaccttgctgctcgtgggattgatgttaaaggggtaactcatatcattaat
tacggcttaccgaaagatttggacttctatattcatcgtgtaggacgtacagcacgtgct
ggaatggatggaattgcctatacaatatatgaaaaccacgatcaaactgctgttgaaaaa
cttttaaaacgtggtgtgaagtttacttattacgatttcaagcaaggagattggataaag
cttgaccgtgctccattaggtgtaccaggaaagaaaaaaacaagtaaacaagcagcagat
aaatcagaacctaataaaaataaggaacaaaaacgaactggtggtaaagcagtagcgaaa
gctaaaaaagtaaaaccaggttataagaaaaaagctcgatttaagcaagcaaaagaagaa
caaagacaaagacgaataaaaaagaaaaaataa
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