Halalkalibacter krulwichiae: BkAM31D_15910
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Entry
BkAM31D_15910 CDS
T04947
Symbol
kdgR_4
Name
(GenBank) Pectin degradation repressor protein KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
bkw
Halalkalibacter krulwichiae
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bkw03000
]
BkAM31D_15910 (kdgR_4)
Transcription factors [BR:
bkw03000
]
Prokaryotic type
Helix-turn-helix
IclR family
BkAM31D_15910 (kdgR_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_5
MCM_C
DUF4423
MarR
HTH_36
Dimerisation
MarR_2
PadR
HTH_27
DnaD_N
HTH_45
DUF742
HTH_23
Penicillinase_R
HTH_11
Rrf2
Fe_dep_repress
HTH_24
HTH_20
DUF7342
Membrane_bind
DUF261
FeoC
DUF6432
HTH_34
HTH_28
HTH_Crp_2
B-block_TFIIIC
Motif
Other DBs
NCBI-ProteinID:
ARK31219
UniProt:
A0A1X9MCQ2
LinkDB
All DBs
Position
complement(2891420..2892049)
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AA seq
209 aa
AA seq
DB search
MVQSVDRALKIIDLISQHKEGRGVTELATHLDLNKSSIYKLLSTLVEHGYIEQNQKTKKY
CLGYKYLELSSILLESIDLRAEAKPYLQELEAETNEVIHLVVYDQGEVIYIEKLEGNETL
RTHSKVGRRAPMHCTSVGKVILSYLPEQEVLSIIEKNGLPRHTDNTITDKDKFLKELHKI
RNQGYGIEIEENEVGITCMATRYLIIEEK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggttcaatcagtagacagagctttaaaaataatcgaccttattagtcagcataaagaa
ggtagaggtgttactgaactagcaactcatcttgacttaaataaaagctctatttataaa
ttgttgagtacacttgttgaacatggatacattgaacaaaatcaaaagacaaaaaagtac
tgtctcgggtataaatacttagaattaagttcaattttactagaatcaattgatttacga
gcagaagccaaaccttatcttcaagaactagaagcagaaacgaatgaagtcattcactta
gtcgtttatgatcaaggggaagtaatatatattgaaaaacttgagggtaatgaaacatta
agaacacactcaaaggtcggtaggagagcaccaatgcattgtacgagtgttgggaaagtc
attttgtcttacttgccggaacaagaagtgctgtcaattattgaaaagaatggattaccg
cgacatacagacaataccattacagataaagacaagttcttaaaagaactccataaaatt
aggaatcaaggttacggtatagaaatagaagaaaatgaagtgggaattacttgtatggcg
acccgatatttgataatagaggaaaaataa
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