Halalkalibacter krulwichiae: BkAM31D_24310
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Entry
BkAM31D_24310 CDS
T04947
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bkw
Halalkalibacter krulwichiae
Pathway
bkw03030
DNA replication
bkw03430
Mismatch repair
bkw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bkw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BkAM31D_24310 (polC_3)
03430 Mismatch repair
BkAM31D_24310 (polC_3)
03440 Homologous recombination
BkAM31D_24310 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bkw03032
]
BkAM31D_24310 (polC_3)
03400 DNA repair and recombination proteins [BR:
bkw03400
]
BkAM31D_24310 (polC_3)
Enzymes [BR:
bkw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BkAM31D_24310 (polC_3)
DNA replication proteins [BR:
bkw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BkAM31D_24310 (polC_3)
DNA repair and recombination proteins [BR:
bkw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BkAM31D_24310 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARK32730
UniProt:
A0A1X9MJ65
LinkDB
All DBs
Position
complement(4401056..4401718)
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AA seq
220 aa
AA seq
DB search
MFRKKPLWPKRKLVKEIPLNTHHSQLTFTIFDTETTGFAVGSHDRIIEIGAVQVKDRQVL
EKTFQTYVNPDREIPFEITDLTGISNATVADAPTVIEAVQSFLHYSEEGEGDVWVGHYAS
FDLLAFKKEINRNQYRIDFPICLDTLDLVGYLSPAKHMLDLEIYASQFGSRIYERHQALG
DALTTAHLFCELLHHLEDRGKKTLADLIEISNITKHYTKF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaaaaaaccattatggcctaagaggaaattggtgaaagagattccattgaac
acccaccactctcagctaacatttacgatttttgatacggaaacaacggggtttgctgta
ggttcacacgatcgaattattgaaattggtgcggttcaggtgaaagaccgtcaagtgttg
gagaagacctttcagacgtatgttaatcctgatcgagaaattccatttgaaataactgat
ttaacgggtatatcaaatgcgactgttgccgatgctccgacggtgattgaagcagttcag
tcctttcttcactatagcgaggagggagaaggagacgtttgggtcggacattatgcgagc
tttgatttactagcttttaaaaaagagattaatagaaatcagtaccgcatcgattttcct
atttgtttagatacgcttgatttagtaggctatttaagcccggccaagcatatgctagat
ttagagatttacgcaagtcaatttggctctaggatctatgaacgtcaccaggcacttgga
gatgccctgacaaccgctcacttattttgcgagctgcttcaccaccttgaagatcgaggc
aagaaaacacttgcagacctaatcgaaatctcaaatattacaaagcattacacaaaattc
tga
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