Bartonella kosoy: D1093_01610
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Entry
D1093_01610 CDS
T06581
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bky
Bartonella kosoy
Brite
KEGG Orthology (KO) [BR:
bky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bky03016
]
D1093_01610 (thpR)
Enzymes [BR:
bky01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
D1093_01610 (thpR)
Transfer RNA biogenesis [BR:
bky03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
D1093_01610 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Dynein_heavy
Motif
Other DBs
NCBI-ProteinID:
QEE08374
UniProt:
A0A5B9CV39
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All DBs
Position
complement(370021..370560)
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AA seq
179 aa
AA seq
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MDRLFSALQIPQQTTQQLVSLQNGLPNAQWINPQNFHITLSFFGEVESTITDALKHAFDT
IKLPSFRLQMRGFDVFSSENVPHSLVVCIEPCETLNLLHEKMQCIRNHLGLAPDEKKFTP
HITVARLLDIKPDDLPPYLSSRGDFSFPPFEVDHFVLFLSPYPSSDTPYIVKGCWPLQR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttatttagtgcccttcaaattcctcaacaaacaacacaacaacttgtatcg
ttgcaaaatggcttaccaaatgcgcagtggattaatccgcaaaattttcacatcactttg
tctttttttggtgaagttgaaagtactataacagatgcactcaagcatgcctttgataca
ataaagcttccttcttttaggctacaaatgaggggatttgatgtttttagttcggaaaat
gttccacattctcttgttgtttgcattgaaccttgtgaaactctcaatcttttgcacgaa
aagatgcaatgtattcgtaaccatttaggtctagcgcctgatgaaaaaaaatttacgccg
catattaccgttgcgcgactgctcgatattaaacctgatgaccttcctccttatctgtct
tctcggggtgatttttcatttcctccttttgaggttgatcatttcgttttatttttatca
ccatatccctcaagtgatacaccatatattgtaaaagggtgttggccacttcaaaggtaa
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