Bartonella kosoy: D1093_03195
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Entry
D1093_03195 CDS
T06581
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bky
Bartonella kosoy
Pathway
bky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1093_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bky03019
]
D1093_03195
Enzymes [BR:
bky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1093_03195
Messenger RNA biogenesis [BR:
bky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1093_03195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QEE08664
UniProt:
A0A5B9CVV7
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All DBs
Position
747509..748924
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AA seq
471 aa
AA seq
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MKVVQLREVFILPIKKEDVFTKLGLPALLIKNLRISGMSKPKPIQEQAIPMMLKGHDILG
IAQTGSGKTLAFGLPILSQILTLGDKRCPKTARALILAPTRELAVQIDEAIRTVAKGAHL
STCLIFGGVSRLKQIKRMEAGVDVLIATPGRLRDLVREKCVDLSQSRFLILDEADRMLDM
GFIHDVKQIAKLLHQERQTALFSATMPKEIAALAKCLLNDPVKIEVAPQGTTALEITQKL
YCVPTSEKKNVLSKLLTNPAFNSVIVFTRTKHGADAVTRHLAKNGYLVATIHGNKSQGAR
QSALKAFRERSVQILVATDIAARGIDIPRISHVINYDLPDEAESYVHRIGRTGRNGESGE
ALTLFDEKIERTRLRAIERLIRMKLVSDSVPEQFAAFPEKLNGLQSGEKENNKERRLKKS
KRQRRFLGRKDDAAQLQRKNSSSPNERHKKAKAAAKRAKAFRFRKSVKKAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagttgttcagctgagggaagtttttattttgcctataaaaaaagaagatgttttt
acaaagttaggtttgcctgctcttttgattaagaatttacgcatttctgggatgagtaaa
cctaaacctatacaagaacaagctattccaatgatgttgaaaggacacgatattttaggg
attgcacagacaggttctggaaaaaccttggcatttggtttgcctattttaagtcaaatt
ttaactttgggtgacaaacgctgtcctaaaactgcacgtgctttgattttagcgccaacc
cgtgaacttgctgttcagattgacgaagcaattcgcactgtggcgaagggagcgcatctt
tcgacgtgtcttatttttgggggagtatcacgtttaaaacaaattaaacgtatggaagca
ggtgtggatgttttgatagccactccagggcgtttgagagatcttgttcgtgaaaaatgt
gttgatctttctcaatctcgttttttgattttggatgaagcagatcgtatgttggatatg
gggtttattcatgacgttaagcaaattgcaaagcttttgcatcaagagcgtcagacagcc
cttttttctgcgacaatgccgaaagaaattgctgcgcttgcaaagtgtttactcaatgat
ccagttaagattgaagttgctcctcaaggtactacagctttagagattacccagaaatta
tattgtgttcctaccagtgaaaaaaagaatgttttaagtaaacttttgacaaatccagct
tttaattcggttattgtttttactcgaacgaaacatggggctgatgctgtcacacgtcat
ttagcaaagaacggctatttagttgcaacaattcatgggaataaatcacaaggtgctcgc
caatctgctttaaaagcttttcgggaaagatcggtccagatccttgttgcaacagatatt
gcggcacgcggtattgatataccaagaataagccacgttattaattatgatttaccagat
gaagctgaaagttatgtgcatcgtattggtcggacaggacgcaatggtgaatcgggtgaa
gcacttacgctttttgatgaaaaaattgaaaggacacggttgcgtgccatagagcgcttg
attcgtatgaaattggtgtctgactctgttccagaacaatttgcagcatttccagaaaag
ctcaatgggctccaaagtggagaaaaagaaaacaataaagaacgccgtttaaaaaaatct
aaacgtcagagacggtttttaggtcgaaaagatgatgctgcacagttacagcggaagaat
tcttcctctccaaatgagaggcataaaaaggcaaaagcagcggcaaagcgtgcaaaggct
tttcgttttcgcaagtcagtcaagaaagcggcttaa
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