Bartonella kosoy: D1093_04035
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Entry
D1093_04035 CDS
T06581
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bky
Bartonella kosoy
Pathway
bky03030
DNA replication
bky03430
Mismatch repair
bky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1093_04035 (dnaE)
03430 Mismatch repair
D1093_04035 (dnaE)
03440 Homologous recombination
D1093_04035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bky03032
]
D1093_04035 (dnaE)
03400 DNA repair and recombination proteins [BR:
bky03400
]
D1093_04035 (dnaE)
Enzymes [BR:
bky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1093_04035 (dnaE)
DNA replication proteins [BR:
bky03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1093_04035 (dnaE)
DNA repair and recombination proteins [BR:
bky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1093_04035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEE08818
UniProt:
A0A5B9CWF6
LinkDB
All DBs
Position
926867..930355
Genome browser
AA seq
1162 aa
AA seq
DB search
MVKDKNKLQEDKNSLPRFIHLRVHSAYSLLEGALKIPQIIQQAISDQAPAIAITDTNNLF
GALEFSQYCLSHGVQPIIGCQLAIDFCDKNDHSRLVKGRHASDFCSIILFAASETGYAHL
VRLVSRAYLDKCDTDPPHIKADWLSEHGEGIIALTGGKGGPINLALSEEKKERAVERLIY
LKKIFSDRLYVELQRHGSYDRGVEAELIELAYVHEVPLVATNEAFFLKREGYEAHDALMA
VSEGQIVSNPDRKRVTPDHYLKSQDEMVALFSDLPEALENSVEIALRCHIATPLRKPILP
RFIEQSAHSENTLEAEDSELLNQAKAGLKMRLKTIGLAEGYTIADYEQRLDYEISVITRM
QFSGYFLIVSDFIKWAKIHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIQYVQKKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VDYLTKLIPATPGNQVELADAIRDEVKFEEEKKKDPVVGRALDIALQLEGLYRHASTHAA
GIVIGDRPLWELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVA
RQEDKIDLSNIPLNDEATYAMMARGETVGVFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPTYNARKHGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHAEMQKQRTRFVNGAVAGGVDKEQADIIFDLLAKFADYGFNKSHAAAYA
IVSYQTAYMKANYPVEFLAASMTHDMTNTDKLNDFRREALRLGIEVIAPSIQTSHRVFEV
GENCIYYSLAAIKGVGETVVDHIVACRGNKIFKDLEDFCARVDLRIVNKRAMESLVCAGA
FDCFNIAREILLANLGTLHARALRILDNNSSGQFDIFGMEGGLKEPLILSQTTPWLPAEK
LYREFQAIGFYFSAHPLDEYQTILAKKRVQTWSHFANAVKGGATAARLAGTVVAKNVRKT
KSGKKMGIIHFSDTSGQYEAILFSEALSDYEEMLEPGKSFIITVSAENRSEGASLRIETI
QSLENEALQQHKMMRLFIKTVDMLPQIEQNLNLGGNGEVGLILIQEGGLREVEIALPKRY
KVNSHVANAMKLIQGVVDVELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaaagataaaaataaactgcaagaggataaaaattctcttcctcgctttattcat
ttgagggtgcattcagcttattccttgcttgaaggggctttaaaaattccccaaattatt
caacaggcgatttcagatcaggcaccagcgattgctattaccgataccaataatttattt
ggtgctttggaattttcgcagtattgcctttctcatggggttcaacccattattggttgt
cagcttgccattgatttttgtgataaaaatgatcattcacgtttggttaaaggacgtcat
gcttctgatttctgttctattattctgtttgctgctagcgaaaccggttatgctcatttg
gttcgtcttgtaagccgtgcttatcttgataaatgtgatactgatcctcctcatattaaa
gctgattggttatcagaacacggtgaaggcataatcgctttaacgggtggaaagggagga
cctattaatcttgccttgtcagaagaaaaaaaagaacgcgctgttgagcgcttaatttat
ttaaaaaaaattttttctgatcgtctttatgtagaattacaacggcatggctcttatgac
cgtggggtagaagcagaacttattgaattggcttatgtgcatgaagttcctcttgttgca
acgaatgaagccttttttctgaagagagaagggtatgaagcgcatgatgcgttaatggct
gtttcagaaggacaaatcgtctctaatccagatcgaaaaagggtgacgccagatcattac
ttgaagtcacaagatgaaatggttgcattgttttctgatcttccagaagctttagaaaat
agtgttgaaattgcattgcgttgtcatattgccacgcctcttcgaaaaccgatattgcct
cgttttatagaacaatctgctcattcagaaaatactttagaagcagaagatagtgaattg
ttaaatcaagctaaagctggtttgaagatgcggcttaaaacaattggattggctgaaggg
tatacgattgcagattatgagcagcggcttgattatgagatttcagttattacgcgtatg
caattttctggatattttcttatcgtttcagatttcataaaatgggcgaagattcatgat
attcctgttggtccagggcggggatctggtgctggttcacttgttgcttatgcattgacg
attactgatgttgatccattgcgtttttctcttctttttgaacgttttctcaatccagat
cgtgtttcgatgccagattttgatatcgacttttgtcaagagcggcgtgaagaagttatt
caatatgttcaaaaaaaatatggacgtgatcaagttgctcaaattattacctttggtaag
ttacaagcccgtgcggttttgcgtgatgtagggcgtgttttagaagttccttatcgtcag
gtggattatcttacaaaattaattcctgccacgccaggaaatcaggtagaattagcggat
gctattagagatgaagtcaaatttgaagaggaaaagaaaaaagatcccgtcgttggacgc
gcattagatatagcccttcagttggagggactttatcgtcacgcttcaacgcatgccgct
gggattgttattggagatcggccgctgtgggagcttgtcccgatgtatcgggatcctcgt
tctgatatgcctgttacacaatttaacatgaaatatgttgaacaggccgggttggtaaaa
tttgattttcttggattaaaaacgcttactgttttgaaaatggccgttgattttgttgct
agacaagaggacaaaatagatttgtcaaatattcctctgaatgatgaagcaacctacgct
atgatggcacgtggtgaaacggttggcgtgtttcaggtggaaagttctggtatgcgcaag
gcgctgattggaatgaaaccagaccgtattgaagatattattgcactggttgcgctttat
cgtcccggtccaatggagaatattccaacctataatgcacgcaaacacggggaagaggaa
atagcttctattcatcctaaaatagatcatctgattaaagaaacacaaggtgttatagtc
tatcaagaacaggtaatgcagattgctcaggtgctggctggttattcgcttggagaagct
gatttattacgtcgtgctatggggaaaaaaattcatgcagaaatgcaaaaacaacgtaca
cgctttgtcaatggagccgttgctggtggtgttgataaagagcaagcggatattattttt
gatcttttagcaaaatttgccgattatggttttaataaatcacacgctgctgcttatgca
attgtttcttatcaaacagcttatatgaaagctaattatcccgttgagtttttagctgct
tcaatgacgcatgatatgacaaataccgataagctcaatgattttcggcgtgaggcatta
aggctgggtattgaagttattgcaccttctatacaaacatctcatcgtgtttttgaggtt
ggtgagaactgtatttattattctcttgctgctattaaaggggtgggagaaacagttgtc
gatcatatcgtcgcttgtcgggggaataagatttttaaggacctggaagatttttgtgca
cgtgttgatcttcgtattgttaataagcgtgcgatggaaagtttagtttgtgctggcgct
tttgattgttttaatattgcacgtgagattttattagcaaatcttggaacgcttcatgcg
cgggcacttcgtattctcgataacaattctagcggacagtttgatatatttggaatggaa
ggtggattaaaagagccattgattttatctcaaacaactccttggttgccggctgagaaa
ctttatcgagaatttcaggctataggtttttacttttctgctcatccattggatgagtat
caaactattcttgccaaaaaacgtgttcagacttggagtcattttgctaatgccgttaaa
gggggggcaacggctgcacggcttgctggaaccgttgtggcaaaaaatgtgcgcaaaaca
aaatctggtaaaaaaatgggaattattcatttttctgatacaagtggacagtatgaggct
attctcttttctgaggctctttcggattatgaggaaatgctagaacctggaaaatctttt
attattacggtgagcgcagaaaatcgctctgaaggggctagtttgcgaattgagacaatt
cagtctttggaaaatgaagcactacagcagcataaaatgatgcgtctttttataaaaaca
gttgatatgcttccacaaattgaacaaaatttaaatcttgggggaaatggagaggtcgga
cttattttaattcaagagggtggcttgcgagaagtcgaaattgcacttcctaagcgatat
aaggtcaattcacatgtagcaaatgctatgaaattaattcagggtgttgtcgatgtcgaa
ttgagttaa
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