Bartonella kosoy: D1093_05980
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Entry
D1093_05980 CDS
T06581
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bky
Bartonella kosoy
Pathway
bky03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bky00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D1093_05980 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bky03021
]
D1093_05980 (rpoC)
03400 DNA repair and recombination proteins [BR:
bky03400
]
D1093_05980 (rpoC)
Enzymes [BR:
bky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D1093_05980 (rpoC)
Transcription machinery [BR:
bky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D1093_05980 (rpoC)
DNA repair and recombination proteins [BR:
bky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D1093_05980 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QEE09176
UniProt:
A0A5B9CXI1
LinkDB
All DBs
Position
1386250..1390461
Genome browser
AA seq
1403 aa
AA seq
DB search
MNHEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPGRISTLLDLTLKDIERVLYFENYIVTEPGLTSLKLHQLLSEEEYMLAIDEFGEDQFTA
MIGAEAIYELLASMELDKIANDLRLELAETTSELKQKKLIKRLKIVENFLESGNKPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
VQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEHPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVSEKEPGEGMAFSDIGELHYALE
NKVVTLHTKIKGRVKNIGKDGKEVAKLYDTTPGRLIIGELLPKNSSISFDIVNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFSYACRAGISFGKDDMVIPDSKSRLVAETEAL
AKEYEQQYNDGLITQGEKYNKVVDAWGKCTDRVADEMMKRIQAVDFDPKTGRQRPMNSIY
MMSHSGARGSANQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISAVDCGTAKGLTMQPIVDAGQIVASLGQRILGRT
ALVDILHPVSGEVILEGGAMIEEADVVKIEEAGIQSVQIRSALTCETRLGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVEIRNRN
VVRNSEGHLVVMGRNMAILIKDELGKERVVHRVSYGAHIFVDDGDVVKRGQRIAEWDPYT
RPVLTEVEGYVGFEDMVDGLSVTETADESTGITKRLVIDWRANPRGAELKPAIIIHADKE
GKSIAKLYKGGEARYMMSVETILSVELGAYVKAGDVIARLPMESAKTKDITGGLPRVAEL
FEARRPKDHAIIAEVSGTIRFGRGYKNKRRIIIEPNDETLEPVEYLIPKGKLFHFQEGDQ
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK
VEITESGDSGYIPGDNVDRIELDEINDNLIAEGKKPASGNPILLGITKASLQTPSFISAA
SFQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGGTISQIRRIAAVRDDLIVDEQ
RKSSNNEAAKAMLTNMTAETVAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaggtcatgaatcttttcaatcctcaagcgccagcgcaaacatttgactct
attcgtatttcgattgcgagtcctgagaaaattttgtcttggtcttatggtgagattaag
aagcctgagactattaattatcggacttttaaaccagagcgtgatggtcttttttgtgca
cgtatatttggcccgattaaagactatgaatgtctatgcggtaaatataaacgcatgaaa
tataaggggattatttgtgaaaaatgtggtgtggaagttaccctttcgcgcgtacgtcgt
gagcgtatgggacacattgagctggcagcacctgttgcgcatatatggtttctgaaatca
ttaccgggtcgtatttctacacttttagatttgactttaaaagatattgagcgtgttctt
tatttcgagaattatattgtaaccgaaccagggttgacatctcttaaactccatcagctt
ctttctgaagaagaatatatgcttgcgattgatgagtttggagaagatcagtttacagcg
atgattggcgctgaagctatttacgagcttttagcgagtatggagctcgataaaatcgcc
aatgatttacgtctcgaattagctgaaacaacttcagagttaaagcagaaaaaattgatt
aaacgacttaagatcgttgaaaattttcttgaatctgggaataagccagaatggatgatt
atgaaaacaattccggttattccaccggatttacgtccattggttccacttgatggtgga
cgttttgcaacatcagatctcaatgatctttatcggcgtgttatcaatcgtaataaccgt
ttgaaacggctgattgaattgcgtgctcctgggattattgtgcgtaatgaaaaacgtatg
gtgcaagaagctgttgacgcattatttgataacggacggcgtgggcgtgtgattacggga
gccaataaacgtccgttaaaatctctttcagatatgttaaagggtaagcaaggccgtttc
cgtcaaaacctacttggaaagcgtgttgattactcgggtcgttctgttatcgtgacaggt
cctgaattaaaattacatcaatgtggtcttcccaaaaaaatggcccttgaattatttaag
ccctttatttatgcgcgccttgatgcaaaaggatattcctcaactgtaaaacaagcaaaa
aagcttgttgagaaggagcatccagaagtttgggatatcttagatgaggttattcgtgaa
catcctgttttactcaatcgtgccccaacattacaccgtttaggaattcaggcttttgaa
cctatcttaattgaagggaaggctatccaacttcatccattggtatgtactgcttttaat
gcggactttgatggagatcagatggcggttcacgttccactttctcttgaagcacaactt
gaagcccgtgttttgatgatgtcgaccaataatattcttcatccagcgaatggagcccct
attattgttccatcacaggatatggttcttggactttattatctctcgattgtttctgaa
aaagaacccggtgaaggaatggctttttctgatataggtgagcttcattatgccttggaa
aacaaggttgtaacgcttcatacgaagattaaaggccgcgttaagaatattggtaaggat
ggaaaagaagttgctaaactttatgatacaacacctggtcgtttgattatcggtgagctt
ttgccaaaaaattcgagtatctcatttgatattgtcaatcaagaaatgacaaaaaagaat
atttctaaaatgattgatcacgtttatcgccactgtggacaaaaagagacggttattttt
tgtgaccgtattatgcagcttggtttttcttatgcttgtcgtgcaggaatttcattcggg
aaggatgatatggttattcccgatagcaagtcacgtttggttgcagaaacagaagccttg
gcaaaggaatacgaacagcaatataatgatggtttgattacacagggtgagaaatacaat
aaggttgtggatgcttggggtaaatgtacagaccgtgttgcggatgaaatgatgaaacga
attcaagccgtcgattttgatcctaaaacaggtcgtcaacggcctatgaattcaatctat
atgatgtcacactctggtgctcgtggttcagctaatcagatgaggcaattggctggtatg
cgtggattgatggcaaaaccatcgggtgaaattattgaaacacctattatttcaaatttt
aaggaaggtctgactgttaacgaatacttcaactctacccatggtgcgcgtaaaggtctt
gcggatactgcgttaaaaactgcaaactctggttatctcacacggcgccttgttgatgtt
gcacaggatgctattatttcagccgttgattgtggtacagcaaaagggcttacgatgcag
ccgattgttgatgcaggacaaattgttgcctctcttgggcaacgaattcttggtcgtaca
gcccttgttgatattttacatcctgtctctggagaggttattcttgaaggtggagcgatg
attgaggaggctgatgtcgtgaagattgaagaagccggaattcaatctgttcaaattcgt
tctgctttaacatgtgaaacacgtcttggtgtttgtgcaaaatgctatggtcgtgatttg
gcgcgtggaacaccggttaatcagggagaagccgttggtgttattgctgctcaatccatt
ggtgagccgggaacgcagctgactatgcgtactttccacttaggaggaactgcacaagtt
gttgattcatcgtatttagaggcatcttatgaaggtacggtggaaattcgtaatcgtaat
gtagttcgtaactctgaaggtcatttggttgttatgggacgtaatatggctatccttatc
aaggatgagttaggaaaagaacgcgttgtgcatcgtgttagctatggtgcgcatattttt
gttgatgatggtgatgtggttaaacgtggccagcgtatagcagaatgggatccttataca
cgtccagttttaacggaagttgaaggttatgtgggttttgaagatatggtcgatggttta
tcagtcactgaaactgctgatgaatctacggggattacgaaacgtttggtgattgattgg
cgtgctaatccacgtggtgcggagctcaaaccagccattatcatccacgcagataaagaa
ggtaagtccattgctaaattgtataagggaggtgaagctcgttatatgatgtcagtggaa
actattctttctgttgagcttggtgcttatgttaaagctggtgatgttattgctcgtttg
ccgatggaaagtgctaagacgaaagatattacaggggggctaccacgggtggcagaactt
tttgaagcgcgtcgtccaaaggatcatgcgattattgcagaagtcagtggtacaattcga
tttggtcgtggttataaaaataaacgccgtattattattgaaccaaatgatgaaactctt
gagccagtagaatatttgattccaaaaggtaagttatttcacttccaagaaggcgatcaa
attgaaaagggtgattatatccttgatggtaatccagcccctcatgatatcttagcgatt
aagggtgttgaagctttggcatcttaccttgttaatgagattcaggaagtttatcgtttg
cagggggttcttatcaatgacaagcatattgaagtgattgttcgtcaaatgttgcaaaag
gttgaaattactgaatctggagattctggttatattccaggtgataatgttgatcgtatt
gaacttgatgaaatcaatgataatttgattgcagaagggaagaaacccgcatctggtaat
cccattcttcttggaattacaaaagcttctcttcaaacgccttcttttatttcagcagca
tcgtttcaggaaacaacgcgcgttctgaccgaagcggcggtttctggcaaaattgatact
ttgcaaggacttaaagagaacgttattgtcggtcgtcttattcctgctggtacaggcggt
acgatttctcaaattcgtcgtattgcagcagttcgtgatgatttaattgtagatgaacaa
cgtaagtctagtaataacgaagcagctaaggctatgttgacaaatatgacagccgaaacc
gttgctgaataa
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integrated database retrieval system
