Bartonella kosoy: D1093_06865
Help
Entry
D1093_06865 CDS
T06581
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bky
Bartonella kosoy
Brite
KEGG Orthology (KO) [BR:
bky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bky03032
]
D1093_06865 (topA)
03400 DNA repair and recombination proteins [BR:
bky03400
]
D1093_06865 (topA)
Enzymes [BR:
bky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1093_06865 (topA)
DNA replication proteins [BR:
bky03032
]
Prokaryotic type
DNA Topoisomerases
D1093_06865 (topA)
DNA repair and recombination proteins [BR:
bky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1093_06865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
B2
Motif
Other DBs
NCBI-ProteinID:
QEE09343
UniProt:
A0A5B9CXC8
LinkDB
All DBs
Position
1571852..1574425
Genome browser
AA seq
857 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSQYKVVASFGHVRDLPAKDGSVLPDQDFSMKWDIDSAAAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLRQKKVLKDKPIKRVVFNAITKKSV
LDAMNNPRDIDTSLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSITTQLKTIRNDHFQARLTMFNQRKIGKLDIQSQERADQIRLMLEKA
QYHTLSVEAKPTKRNPFPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGIEINGEMAGL
ITYMRTDGVQIAPEAIDAARKVIHESFGKDYVPEKPRFYSTKAKNAQEAHEAIRPTDFQR
TPNQVRNFLDNDQAKLYELIWKRAIASQMCSAEIERTTVEIEAKQGDNRANLRATGSVIR
FDGFISVYTDQRDEENNEENETTRLPQINTGESLTKEKVESVQHTTEPPSRYSEASLIKK
LEELGIGRPSTYASTLATLCDRGYIIIDKRKLIPDAKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVLRDFWDGFNASISNIQELRIANVLDVLNVTLAPLAFPEREDG
SDVRSCPLCKNGQLSLKLGRYGAFVGCSNYPECKYTRQLGTNIEEDNEAVRNDEPVMLGI
DPETGKDISLRNGRFGPYIQRGESKEVKRAGLPKEWQAENITLEKALALLSLPREIGIHP
ETGKMITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLAEQQENKTKQSRTTSA
ALATLGEHPEGGTVTVRNGRFGPYVNWGKINATLPKEKDPISVTLSEALELISAKASSKK
TTSKRASSKTKAKTKET
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataaatatcttgga
tctcaatacaaagttgtcgcatcatttggacatgttcgtgatttacctgcaaaagatggt
tccgttttacccgatcaagatttttcgatgaaatgggatatagattctgcggctgctaaa
cgtttaaatgaaatagcaaaagctgttaaagaagctgatagccttatcttggcaacagac
cctgatcgcgaaggagaagctatttcatggcatattctcgatgttcttcgtcaaaaaaaa
gttttaaaagataaacctattaaaagagttgtcttcaatgccatcactaaaaaatctgta
ctcgatgccatgaacaatccacgtgatattgatacatcacttgtcgatgcttatcttgca
cgtcgtgctctcgattaccttgtaggttttacactttcacctgttttatggcgtaaactc
cctggtgcacgctcagctgggcgcgttcaatcggttgctttacgtattatttgcgaccgt
gaatcagaaatagaacattttattaaagaagattattggtccattacaacacagttaaaa
accattcgaaatgatcatttccaagccagactgacaatgtttaatcaaaggaagattgga
aaacttgatattcaatctcaagaacgagcagatcaaattcgccttatgctggagaaggct
caatatcatacactcagtgttgaagcaaaacctacaaagagaaatccttttcctccgttt
acaacttctacactacaacaagcagcttcttcaaaattaggcttttcagcttctcgcacg
atgcaaattgcccaaaagctttatgaagggattgaaattaatggtgaaatggcagggctt
attacttatatgcgtaccgatggtgtacaaatagcgccagaagccattgatgctgcaaga
aaagtcattcatgaatcttttggtaaagactatgttcctgaaaaaccacgtttttactca
acgaaagcaaaaaatgcacaggaagcgcatgaagcaatccgcccaacagattttcaacgc
actcccaatcaagtccgtaattttctcgacaatgatcaggcaaagctctatgaactgata
tggaagcgcgctattgccagccaaatgtgttctgctgaaattgaacgtacaaccgttgaa
attgaagccaagcaaggagacaaccgtgcaaatcttcgtgcaacaggatctgttattcgt
tttgacggatttatttccgtctatacggatcaacgagacgaagaaaataatgaagaaaat
gaaacaacacgtttaccgcaaataaacacgggtgaatcacttacaaaagaaaaagttgaa
tctgtacaacataccacagagcccccttcccgttattctgaagcttcattaattaaaaag
cttgaagaattaggaattggtcgtccttcaacttatgcctccacattagcgacattgtgt
gatcgtggatatattatcattgataaacgcaaacttattcctgatgctaaaggccgtatt
gttacagcctttcttgaaaacttctttaatcgctatgtagaatatggttttacagcagat
cttgaagaaaagctggatcttatatcggatggcaaactttcttggaaagatgtattacga
gatttttgggatggatttaatgcctctattagcaatatccaagaactccgtatcgccaat
gtccttgatgttttaaatgtaacattagcacctcttgcctttcctgaacgtgaagacgga
agtgatgtgcgttcctgtcctctctgtaaaaatggtcaattatcattaaaactcggtcgt
tatggtgcttttgttggctgttccaattatcctgaatgcaaatacacacgccaacttggt
acaaatatagaagaagataatgaagcagtgcgcaatgatgaacctgttatgcttggaatt
gatcctgaaacaggaaaagatatttctcttcgcaatggccgttttggtccctatattcaa
cgaggtgaaagcaaagaagttaagcgtgcaggactaccaaaagaatggcaggcagaaaat
ataacccttgaaaaggccttggctttactatcccttccccgtgaaattggcattcatcct
gaaacaggaaaaatgatcacggcgacaattggacgatatggtccctaccttagtcataat
ggaaaatctgcacgccttcttcatgcagatgaagtgtttgatattggtatcaatcgcgct
gttacagtattggcagaacaacaagaaaataaaaccaagcaaagtagaacaacatctgca
gcattggcaacattaggggagcatccagaaggaggaactgtcactgtgcgtaatggccgt
ttcggtccttatgtcaattggggtaaaattaatgcaacattgccaaaagagaaagatccc
attagtgtaacactttcagaggcattagaacttatatcggctaaagcatcgagtaaaaag
acaacttcaaaaagagcttcttccaaaacaaaagcaaaaacaaaagagacataa
DBGET
integrated database retrieval system
