Blautia sp. SC05B48: EYS05_04345
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Entry
EYS05_04345 CDS
T06243
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
blab
Blautia sp. SC05B48
Pathway
blab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EYS05_04345 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blab03400
]
EYS05_04345 (mfd)
Enzymes [BR:
blab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EYS05_04345 (mfd)
DNA repair and recombination proteins [BR:
blab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EYS05_04345 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
Cas3-like_C_2
RecG_dom3_C
MFD_D3
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QCU01586
UniProt:
A0A4P9EAG8
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All DBs
Position
complement(954552..957878)
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AA seq
1108 aa
AA seq
DB search
MEAFLHPLQGLAEFEGIKKRCGANCGILNVSGCMESQKVHLMYGLSGLFPYHLILADDER
NAKEIYEDYRFYDKNVYFYPAKDLLFFQADIHGNLLIRQRMRVIRALLEQEEVTVVTSID
GCMDFLMPLEKIRSRLLHFKSDSVIDLDQLKEELVELGYERTGQVELPGQFSVRGGIIDI
YPLTEDNPWRIELWDDEVDSIRSFDAESQRSLENVDEITIYPAAEKMDGEDMVSFLEYFP
EEKTLVFLDELNHLAENGEGVEEEYRQSRMHREEKGEANLPEQWLCGFQELQKKLNRRNC
VAVSALSPRRSGWKINEEFDLTVKSVDSYNSSFELLVKDLLQYKSQGYRIALLSGSRTRA
ERLAKDLSEEGLNAFYSQDMDRIISPGEIMVVYGHARRGFQYPLIKFAVMTETDIFGKEQ
KKRKKKKKYSGNRIQDFAELSIGDLVVHEKHGLGIYRGIEKVEVDRVVKDYIKIEYRGGS
NLYILATQLDALQKYSGSSENAKTPKLNKLGGQEWNKTKSRVKGAVKNIAKELVELYAVR
QEKEGYVCGPDTVWQKEFEEMFPYEETEDQLAAIEDTKRDMESTRIMDRLVCGDVGYGKT
EVALRAAFKAVQESRQVVYLVPTTILAQQHYNTFVQRMKEFPVKVELLCRFRTSAQQKKT
IEGIKKGQVDIVIGTHRVLSKDVEFKNLGLLIIDEEQRFGVTHKEKIKQMKKDVDVLTLT
ATPIPRTLHMSLIGIRDMSVLEEPPMDRVPIQTYVMEYDEETVREAIRRELRRGGQVYYV
YNRVNDIAEVALRISRLVPEARVDFAHGQMSQRELEQVMYDFINGDVDVLVSTTIIETGL
DISNVNTMIIHDSDRYGLSQLYQLRGRVGRSNRTAYAFLMYTKNKMLQETAEKRLSAMRE
YSDLGSGFKIAMKDLELRGAGNLLGAQQHGHMNAVGYDLYCKMLSEAVKEAKGIRTMDDF
ETTIDLNIDAFIPDSYISNEFQKLDIYKRIAGIESQQEYDDMLEELIDRFGEPTKAVLNL
LAIARLKALAHQGYVTEIKQIGKDVRITLYEKAKLDPAGIPAIMAQYRRGLQFKADHEPK
FILTPQGRLIEELMKFAGELAKLAEPLE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatttttgcatcctctgcagggtcttgcagagtttgagggaataaaaaagcgc
tgtggcgcaaactgcggaattcttaatgtttccggatgcatggagtcccagaaggtccat
ctgatgtatggactttccgggctttttccatatcatctgatccttgcggatgatgagcgc
aacgcaaaggaaatctatgaggattaccgattctatgacaaaaatgtatatttttatccg
gcaaaggatcttctgttttttcaggcagatattcacggaaatcttctgatccggcagcgg
atgcgtgtgatccgggcacttctggaacaggaagaagtgaccgttgttaccagcattgac
ggatgtatggatttcctgatgccgctggaaaagatcagaagcagacttcttcattttaaa
agtgacagtgtgatcgatctggatcagctgaaggaagagctggtagagctggggtatgaa
cgcactggtcaggtagagcttccggggcagttttctgtgcgtggaggaatcattgatatc
tatccgctgacagaggataatccctggcgtatcgaactgtgggatgatgaggtggattct
atccggagctttgatgcggaaagtcagagatctctggaaaatgtagatgaaattacgatt
tatccggccgcagaaaagatggacggagaagatatggtatcctttctggagtattttccg
gaagaaaaaacactggtatttctggatgaactgaaccacctggcagaaaacggcgagggt
gtggaggaagagtaccgtcagagtcgtatgcacagagaggaaaaaggcgaggcaaatctt
ccggagcagtggctatgtggctttcaggaactgcagaagaagctgaacagacggaattgt
gtggctgtatccgcactttctcccagacgttccggatggaagatcaatgaggaatttgat
cttacggtgaagtctgtagattcttataacagcagctttgaacttctggtaaaggatctc
cttcagtataagagtcagggataccggatcgcattgctctccggttccaggaccagggcg
gagcgtctggcaaaggatctttcagaggaaggactgaatgctttttacagccaggacatg
gatcgtatcatcagtcccggggagatcatggtggtctatggtcacgcaagacgtggcttc
cagtatccgctgatcaaatttgcagtgatgacggaaaccgatattttcggcaaagagcag
aaaaagcgcaaaaaaaagaaaaagtacagcggaaacaggatccaggattttgcagagctt
tccattggtgatcttgttgttcatgaaaagcacggactgggtatttaccgtggaatcgaa
aaggtagaggttgaccgtgttgtgaaggattacatcaagatcgaataccggggcggcagt
aatctctatatcctggcaacccagctggatgctttgcagaaatattccggatcctccgaa
aatgcaaaaacgcccaagctgaacaagcttggcggtcaggagtggaataagaccaagagc
cgtgttaagggtgcggtaaaaaatatcgcaaaagagctggtagagctttatgcagtacgc
caggagaaagaggggtatgtctgcggaccggataccgtatggcagaaggaatttgaggag
atgtttccctatgaggagacagaggatcagctggcagccattgaggataccaagagagat
atggaaagcaccaggatcatggatcgtcttgtgtgtggtgacgttggttacggaaagacg
gaggtggctttaagagctgcgtttaaggcagtacaggaaagccggcaggtggtttatctg
gtccctaccaccattcttgcccagcagcattacaatacctttgtacagcgtatgaaagaa
tttccggtgaaggtggagcttctctgccgtttccggacatctgcccagcagaaaaagacc
atcgaagggatcaaaaaggggcaggtagatattgtgatcggcacccacagagttctttca
aaagatgtggaatttaaaaatcttggacttctgatcattgatgaggagcagcgcttcggt
gttactcacaaggagaagatcaagcagatgaaaaaagatgtggatgtactgacgctgacg
gcaacgccgattccgagaactcttcatatgagtctcatcggtatccgtgatatgagcgtt
ctggaagagccgccgatggatcgtgtgccgatccagacatacgttatggagtatgatgag
gagactgtccgggaagccatccgcagggagcttcgccggggtggacaggtgtattacgta
tataatcgagtcaatgacattgccgaagtagcccttcggatatccagacttgtgccggag
gccagagtggattttgcacatggacagatgagtcagagggaactggagcaggtaatgtat
gattttatcaacggagatgtggatgtgctggtttctaccaccatcattgaaacaggactg
gatatttccaacgtaaacaccatgatcatccatgattcggacagatatggcctttcccag
ctttatcagctacgtgggcgtgtaggacgttccaacaggactgcttatgcattcctgatg
tataccaaaaacaagatgctccaggagaccgcggagaaacggctcagcgccatgagggag
tattcagaccttggaagcggttttaagatagctatgaaggatctggagcttcgtggagca
ggaaatcttcttggtgctcagcagcacgggcatatgaacgcagttggttatgacctttac
tgcaagatgctcagtgaggctgtcaaggaggcaaagggaatccggactatggatgatttt
gagacgaccattgatcttaacattgatgcgtttattccggattcctatatcagtaacgag
ttccagaagctggatatttataagcgtattgccggtattgaaagccagcaggagtatgac
gatatgctggaggagctgatcgaccgttttggagagccgacaaaagctgtgctgaacctt
ctcgccattgcaaggctgaaggctcttgcccatcaaggatatgtgacggagatcaagcag
attggaaaagatgtccggatcacgctctatgaaaaggccaagctggatcctgcaggtatc
ccggctattatggcgcagtacaggagaggtttgcagtttaaggctgatcatgagccgaaa
tttatcctgacaccacagggaaggctgatcgaagagctgatgaagtttgcgggggagctg
gcaaaactggcagagccactggagtaa
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